Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3289 |
Symbol | |
ID | 8020973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3471490 |
End bp | 3472947 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832084 |
Product | transcriptional regulator, GntR family with aminotransferase domain protein |
Protein accession | YP_002983227 |
Protein GI | 241664867 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGTCC ATTTGACGAT CCACGGCCGG CACGACCTTG CCGGCCAACT CTATCGACAA CTCCGCACCG CCATCCTCGA TGGTCGGCTC GTGCCGGGCG AGCGCCTGCC CTCCACGCGC GACCTCGCGC TGCAGATCGG TGTGTCGCGC AAGACCACGC TCGACGTATT CGAGCGCCTC ATTGCGGAAG GCTATCTACA GCCGCGCGCC GGCTCCGGCA CGTTTGTGGC CGAAGCCACC GAAGGATTGC GCGCCCGCAC GCCGGCCGCC TCGCCTGCGG CGCAACTTGC GTCGCCCACG CCCGCCGTAC GCACCTTCGA CACGCCCTGG AACAACATGC CCGCGGTGCT GCCCCTGCCG CGCGCGAATC TCGTCTACGA CTTTGCGGGT GGCGTGACGG AGAAGCGCCA GTTTCCGTTC GACGTGTGGC GCCGTTGTGT TGCGCATGCG CTGCGCCAGC AGGCACGCGG GCGTGGCGGC TATCAGGACC CTGCGGGCGA CCAGGCGCTG CGCCTGGCCA TCTCGCGGTA TCTCGCATTC AGCCGCGCGG TGGTGTGCGC TTGGGCCGAT ATTGTCGTCA CGCAGGGCGC GCAGCAGGCC ATCGACCTGA TCGCTCGCGT GCTCGTGCGC CCCGGGGATA CGGTGGCGAT TGAAGACCCG GGTTACCCGC CCGCGCGCAT TGCGCTGCAG GCCCTCGGTG CCAAGGTCGT GCCGGTGCCG GTCGATGCGG AAGGCCTGGT CGTCGATGCG CTGCCCAAGC GCGCCAAGCT CGTCTACGTA ACGCCGTCGC ACCAGTTTCC GCTGGGCATG CCGATGAGCC TGGCGCGCCG AGCGCAACTG CTCGACTGGG CGCAGCGCCA TGACGCGCTG ATCATCGAAG ACGATTACGA CAGCGAATTC CGCTTCGACG GCCGTCCGAT GGAATCGCTC AAGAGTCTGG ACGCTGCGGG TTGCGTCGCT TATGTGGGTA CGTTTTCGAA GACGATCTTT CCGGAACTGC GGATCGGCTA TGTGGTGCCG CCGGCCTCGC TGGTGACGCC GTTGCGGCAC GCCAAGCAGG TGGCCGACTG GCACACTGAA TCGCTCATGC AGGCGGCGCT GGGCAAGTTC ATGCTCGACG GCGATTTCGC CAAGTACCTG CGGCGCATGC ACAAGGAATA CGCGGCGCGC CGGGATGCGC TGCTGCGGCA TCTGCGGGGC CCGCTGGCAC CGTGGCTGAC GCCCGTGCCG TCGGCGGCGG GCATTCACAT GGCAGCGCAG GTGGGCCCAC CGTTGCCCGA GGCCGAGCTG GTGAAGCTGG CGGAAAGCGT GGGCGTCGGG CTGTACGGCA CGGCCAGGAT GTATGTGGCG CGGCCGGCGC AACCCGGGCT GCTGATCGGC TATGGCCACG TGAACGTTGC CGAGATCGAC GCGGGCCTCG GCAAGCTGGC GGAGGCGCTG ACCAAGGTGG CTACCTGA
|
Protein sequence | MDVHLTIHGR HDLAGQLYRQ LRTAILDGRL VPGERLPSTR DLALQIGVSR KTTLDVFERL IAEGYLQPRA GSGTFVAEAT EGLRARTPAA SPAAQLASPT PAVRTFDTPW NNMPAVLPLP RANLVYDFAG GVTEKRQFPF DVWRRCVAHA LRQQARGRGG YQDPAGDQAL RLAISRYLAF SRAVVCAWAD IVVTQGAQQA IDLIARVLVR PGDTVAIEDP GYPPARIALQ ALGAKVVPVP VDAEGLVVDA LPKRAKLVYV TPSHQFPLGM PMSLARRAQL LDWAQRHDAL IIEDDYDSEF RFDGRPMESL KSLDAAGCVA YVGTFSKTIF PELRIGYVVP PASLVTPLRH AKQVADWHTE SLMQAALGKF MLDGDFAKYL RRMHKEYAAR RDALLRHLRG PLAPWLTPVP SAAGIHMAAQ VGPPLPEAEL VKLAESVGVG LYGTARMYVA RPAQPGLLIG YGHVNVAEID AGLGKLAEAL TKVAT
|
| |