Gene Rpic12D_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3282 
Symbol 
ID8020966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3465465 
End bp3466916 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content70% 
IMG OID644832077 
Producthistidine kinase 
Protein accessionYP_002983220 
Protein GI241664860 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCGC CGCGCAGTCC TGATCAAGCG CCGGCGCAGT CCGCTCCGGC GCGTGCCCGC 
AGCCTGCGTG CGCGGCTGGT GCTATGGCTG GCGTTGCCGC TGGTCGTCTA TGTGGCGGCC
GATGGCTGGC TCGACCTCGC CGCCGCGCGC CACAACGCCG ATCTCGTGCA CTTTCATGCG
CTGGACACGG CCGCCCAGAT GATCAGCGGG CAGATCGAGT GGGATGAAGG CCGCCTGCGC
GTGTCGGTGC CGCCGGCTGC GCTGGCCGTG TTTGCCGCGC CCGAAACCCC GGTGCGCGAT
CAGGTGACGT ACCAGGTCAG CACCGAGCAC GGCCGCCTGC TGGCCGGGCG GCTCGACTTC
GGCACGCGCC CCGCGTTTGA CGCGGCGGGC CTCGCCGATG CCGGCACCTA CACCGATACC
GTGGAGGGCC AGCCCGTGCA CGTGGCCGCC GTGGTGCGCA CCATGTACGA CGCCGGACGC
ACCGAACGCG TCGTCACGCG CGTCGCGCAA ACCATGAACG GGCGCGACGC GATGATCCGC
CAGTTGTGGT GGCCCGCCAC CGTGCGCCAG CTCGCGCTCG TGGGGCTGGC GCTGGCGATG
ATCCTCATCG GCCTGACGCT GGAGTTGCGG CCGATCTTGC GGCTGGCCGG CAATGTGTCG
GCACGCGCCC CCACCGACCT CGCGCCGCTC GACCCCGACG GCCTGCAGCA CGAGTTGCAG
CCGATTGCTG GCGCGTTCAA CCAGTACCTG CAGCGCATTG CCGACAACGC GCTCACGCAG
AAGCGCTTCA TTGCCGATGC CGCGCACCAG ATGCGCACGC CGCTGGCGAT TCTCGATACG
CAGATGCAGG TGGCGGCGCA AACCAACGCA GATGCCGCGC TGCATGAAGT CCTGAGGGCC
GCGCGCACCA GCACGCGCAA CCTGGCGGAT CTCATCAACG ACTTGTTGCT GCTGTCTCAG
GCCGAAGCCT CGGCCGCGAC GAGCGAGGTG GTGGACCTCT CTCAGGTGGC GCGCACCGTG
CTGGAAGACC TCGCACTGCT GGCCGATGGC CGCCGGATCG ACCTGGGCAT CGAGCTTGCA
GACCTGCCCG TGTGGACGTC GGGCAACCGC ACGCTGATTG CCGCCCTGTT GTTCAACCTG
GTCGACAACG CTGTGCGTTA CACGCAGGAA GGCGGCCACG TGACGGTGCA GGTGTCGGCG
GACTACGGTT GGGCGATGCT GACCGTGACC GACAACGGCC CCGGTATTCC CCCCGAGGCG
TACACACGCG TGTTCGAGCG CTTTACGCGT CTGGACGGCA CGCAGACCCA GGGCACTGGC
CTGGGCCTGG CGATCGTGCG GCAGATCGTC GATCGCATGG GCGGCCAGAT TGCGCTGGCG
CCCGGGCCCG GTGGCATCGG GCTGGCGGTC ACGGTCTGGC TGCGGCGGAC GAGCGCGCCC
GCTGCAGGGT AA
 
Protein sequence
MPPPRSPDQA PAQSAPARAR SLRARLVLWL ALPLVVYVAA DGWLDLAAAR HNADLVHFHA 
LDTAAQMISG QIEWDEGRLR VSVPPAALAV FAAPETPVRD QVTYQVSTEH GRLLAGRLDF
GTRPAFDAAG LADAGTYTDT VEGQPVHVAA VVRTMYDAGR TERVVTRVAQ TMNGRDAMIR
QLWWPATVRQ LALVGLALAM ILIGLTLELR PILRLAGNVS ARAPTDLAPL DPDGLQHELQ
PIAGAFNQYL QRIADNALTQ KRFIADAAHQ MRTPLAILDT QMQVAAQTNA DAALHEVLRA
ARTSTRNLAD LINDLLLLSQ AEASAATSEV VDLSQVARTV LEDLALLADG RRIDLGIELA
DLPVWTSGNR TLIAALLFNL VDNAVRYTQE GGHVTVQVSA DYGWAMLTVT DNGPGIPPEA
YTRVFERFTR LDGTQTQGTG LGLAIVRQIV DRMGGQIALA PGPGGIGLAV TVWLRRTSAP
AAG