Gene Rpic12D_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3268 
Symbol 
ID8020952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3447920 
End bp3450145 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content65% 
IMG OID644832063 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_002983206 
Protein GI241664846 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCC GTTATCCCGA ATCCGAACCG GCTGTGCGTA CGGTCAAGCA CAAGCTTGAG 
CCCACCGCCG GTACTGGTAC TGCTGCAGCC GCCGAGCCGC AGGCACGCAG CACGCACACG
ACGCATACCA CGCTGTCCGC CAAGGATGTG CGCAAGCTGT CGATGTTCTC GTCGGCGCTG
GTCAAGCCCG CCATTGTCGA TAGCTTCCGC AAGCTGTCGC CGCGCGCGCA GGCCAAGAAC
CCGGTGATGT TTGTCGTCTA CGTCGGCAGC ATCCTCACCA CCATCCTGTG GGTGATGGCG
CTGCGCGGCC AGGCCGAAGC GCCGGCGGGC TTCATCCTCG CCGTATCGGT GTGGCTGTGG
TTCACGGTGC TGTTTGCCAA CTTTGCCGAA GCGCTGGCCG AGGGCCGCAG CAAGCAGCAG
GCCGCATCGC TGCGCGGCAT CAAGACCACG GTGCAGGCCA AGGTGCTGGC GGATGCCGCC
CGCCGTGACC GTGTGGAAGC ACGCGCCGCC ACCGCGCTGC GCCGTGGCGA CATCGTGCTC
ATCGAAGCCG GCGACATGGT GCCCGGCGAC GGCGAGGTGA TCGAAGGCGT GGCCTCGGTG
GACGAAAGCG CCATCACCGG CGAATCGGCA CCGGTCATTC GCGAATCGGG CGGGGATTTC
TCGTCCGTGA CGGGCGGCAC ACGCGTGCTG TCGGACTGGA TCATCGTGCG CATCACCGCC
AACCCCGGCG AGAGCTTTCT CGATCGGATG ATCTCGATGG TGGAAGGCGC CAAGCGCCAG
AAGACGCCCA ACGAACTGGC GCTGACGATC CTGCTGGTGA GCCTGACCAT CATCCTGATG
CTGGCGACCG TCACGCTGCT GCCGTACTCG ATCTTCTCGG TGGATGCGAT GAAGGCTGGT
TCGCCGATCA CGATTACCGT GCTCGTGGCG CTGCTGGTGT GTCTGATCCC GACCACCATC
GGCGGGCTGC TCTCCGCCAT TGGCGTGGCG GGCATGAGCC GCATGATGCA GGCCAACGTG
ATCGCCACGT CAGGCCGCGC CGTAGAGGCG GCTGGTGATG TGGATGTGCT GCTGCTCGAC
AAGACCGGCA CGATCACGCA CGGCAACCGT CAGGCATCGC GCTTCATCCC GGCGCCGGGC
GTGACGGCCA AGCAGTTGGC CGAGGCGGCA TGGCTGTCGT CGCTGGCCGA TGAAACGCCG
GAAGGCCGCA GCATCGTCAC GCTCGCGCGC AACCTGGGCG AGGCGTCCAT CGATGAAGCG
GCGCTGGCGA AGACGCAACC GGTGTACGTC GCCTTCTCTG CGCAAACGCG CATGAGCGGC
ATCAACGTCT CCCATGCAGG CGACGCCCGT CAGATTCGCA AGGGCGCGGC CGATGCGATT
CGCACCCATG TGACGCTGTT GGCCGGCAAG TTTCCCGATG CCGTGTCGAC GGCTGTGGAT
GACGTGGCAC GCGCGGGCGG CACGCCGCTG GTGGTGTCCG ACAACGACCG CGTGCTCGGC
GTGGTGGAAC TGAAAGACAT CGTAAAGGCC GGCATCCGCG AGCGCTTTGC CGAGCTGCGC
CAGATGGGCA TCAAGACCGT GATGATCACC GGCGACAACC GTTTGACCGC CGCGTCCATC
GCAGCCGAAG CCGGCGTCGA TGATTTCATC GCCGAAGCCA CGCCCGAGAC CAAGCTCGCA
CTCATCCGCG AACAGCAGGC GCAGGGCCGC CTCGTTGCCA TGACCGGTGA CGGCACCAAC
GATGCGCCCG CACTGGCACA GGCCGACGTG GCCGTCGCCA TGAACAGCGG AACGCAGGCC
GCTAAGGAGG CCGGCAACAT GGTCGACCTG GATTCCAGCC CGACCAAGTT GATCCAGATT
GTCGAGATCG GCAAGCAGAT GCTGATGACG CGCGGCTCGC TCACCACGTT CTCGATCGCC
AACGATGTGG CGAAGTACTT CGCGATCATC CCGGCCGCAT TTGCGACGAC GTATCCGCAG
CTTGCCGCGC TGAACGTGAT GCACCTGGCC ACGCCCGCAT CGGCCGTGAT GAGCGCCGTG
ATCTTCAATG CGCTGATCAT CGTGTTCCTG ATTCCGCTGG CGCTCAAGGG CGTGAAGTAC
CGCGCGCTTG GCGCTGCCAC GCTGCTGCGC CGCAACCTCT TGATCTACGG CCTGGGCGGC
CTGCTGCTGC CCTTCCCGGG CATCAAGATC ATCGACATGT TCCTGGCCGC GATGGGCTGG
GTTTAA
 
Protein sequence
MAIRYPESEP AVRTVKHKLE PTAGTGTAAA AEPQARSTHT THTTLSAKDV RKLSMFSSAL 
VKPAIVDSFR KLSPRAQAKN PVMFVVYVGS ILTTILWVMA LRGQAEAPAG FILAVSVWLW
FTVLFANFAE ALAEGRSKQQ AASLRGIKTT VQAKVLADAA RRDRVEARAA TALRRGDIVL
IEAGDMVPGD GEVIEGVASV DESAITGESA PVIRESGGDF SSVTGGTRVL SDWIIVRITA
NPGESFLDRM ISMVEGAKRQ KTPNELALTI LLVSLTIILM LATVTLLPYS IFSVDAMKAG
SPITITVLVA LLVCLIPTTI GGLLSAIGVA GMSRMMQANV IATSGRAVEA AGDVDVLLLD
KTGTITHGNR QASRFIPAPG VTAKQLAEAA WLSSLADETP EGRSIVTLAR NLGEASIDEA
ALAKTQPVYV AFSAQTRMSG INVSHAGDAR QIRKGAADAI RTHVTLLAGK FPDAVSTAVD
DVARAGGTPL VVSDNDRVLG VVELKDIVKA GIRERFAELR QMGIKTVMIT GDNRLTAASI
AAEAGVDDFI AEATPETKLA LIREQQAQGR LVAMTGDGTN DAPALAQADV AVAMNSGTQA
AKEAGNMVDL DSSPTKLIQI VEIGKQMLMT RGSLTTFSIA NDVAKYFAII PAAFATTYPQ
LAALNVMHLA TPASAVMSAV IFNALIIVFL IPLALKGVKY RALGAATLLR RNLLIYGLGG
LLLPFPGIKI IDMFLAAMGW V