| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3236 |
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| Symbol | |
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| ID | 8020920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3415973 |
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| End bp | 3418027 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832031 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_002983174 |
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| Protein GI | 241664814 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCC GACCATTGTG TTCGGCGGCG TTGCCGCTTG CTGTTTTCTT GTCGATGTCG
CTGGCTGCCT GTGGCGGCAG CGACGATACT CCGACCACGC CTGCCGCCAG CGCTGCCCCC
GCGGGCACCA AGGCCACGCT GGCCGTGCTG GAAACGACCG ACCTGCACAC GAACGTGCTG
TCGTACGACT ATTTCAAGCT TGCGGTCGAC AATTCGCTCG GCTTCGAGCG CGTGGCGACG
CTCATCAACC AAGCACGTGC GCAGTTTCCG AACACGCTGC TGCTGGATAA CGGCGACACC
ATCCAGGGCA CCGCGCTGTC GGACTACCAG GCCATGGTGA GCCCGGTCAC GTGCGACCAG
ACGCTGGCGA TCTACAAGGT GATGAACGCT GCCAAGTTCG ACGGCGGCGG CATCGGCAAT
CACGAGTTCA ACTATGGCCT GCCGTATCTG TCGCAGGTTA CGGGCAATAC GTTCAACGTC
GATGGCCTGC CTGATCCGGC CACGCAGAAG AAATGCGCAG GCCCGGCATT CCCGCAGGTG
CTGGCCAACG TGGTGAGCGC GAAGACCAAC GCGCCGCTCT TCCAGCCGTA CACGATCATC
ACCAAGACGG TAACCGCCAC GGCGCCGGAT GGCAGCACGA TCAGCGCACC GGTCAAGATC
GGCATCATCA GCTTCACGCC GCCCACCATC ACAAGCTGGG ACAAGCGCTG GCTCGACGGC
AAGGTCTATA CGGTCGGCAT CAAGGAAACG GCAGCCAAGT ACATCCCTGA AATGCGCGCG
AACGGCGCCG ACCTGGTGGT GGCGATCTCG CACGGCGGCC TGGATAACTC GACGTATTCG
CCGACGATGG AAAACGGCAG CTGGTGGCTG TCGACCGTGC CGGGCATCGA TGCCATGTTG
ATCGGCCACT CGCACCAGCT CTTCCCGGAT GCAAAGAGCA CGGTCAGCCA GTTCAACCTG
CCGGGTGTAG ACAAGGTGGC CGGCACCGTG AACGGCGTGC CGACCGTGAT GGCCAATTAC
TGGGGCAAGC ACCTCGGTGT GATCAAGCTG GGCCTGACGT TCAACGGCAC GAACTGGGTC
GTCGACAAGA CGCAGACCAC GGTGGAAGCG CGTTCGATCC AGAACGCCGA CAAGACGTAC
GTGGCCGCCG ACCCGACGGT CTCGGCCGCC ATTGCCACGG AACACCAGGC GACGATCAAC
TACGTGAAGA CGCCGGTGGG CAGCACCGAC TTCAACATGA GCACGTACTT TGCCGACGTG
GGCGACCCGG GCGCGATCGA GATCGTGAAC CAGGCGCAGG CCCAGTATGT GTCCGACTAT
GTCCAGGCGA ACCTGCCGCA ATACGCGTCG CTGCCGGTGC TGTCGGTAAG CGCGCCATTC
AAGAGCGGCT TTGGCGGCGG TACGGATTTC ACCGATGTTG CAGCCGGCCC GCTGGCGATC
AACAACGCAG CTGACCTGTA CCTGTATCCG AACACGGTCT ACGCGGTGAA GGTGGCCGGC
TCCGACATCA AGAACTGGTT GGAAACGGCA GCCAAGCGCT TCAACACCAT CGACCCGACG
CAAGCGACGG TGCAGAAGCT GGTGAGCACG TTCCCGGGCT ACAACTTCGA CATGTTCACC
ACGCCGGACC TGACGTATGA GATTGACGTC ACGCAGCCAG TCGGTAGCCG CATCAAGAAC
CTGATGTACA AGGGCGTGGC ACTCGACCCG GCAGCGCAGT TCATCGTGGC GACCAACAAC
TACCGCGCAA GCGGCGGCGG CAACTTCCCC GGCCTGGATG GCAGCAAGAC GATCTATGCG
TCGCCCGATG CCAACCGTGA CGTGCTGATC AGCTACATCA AGAAGATCGG CAGCGTGAAG
CGTGCGACGA ACGGCTCGCA GCGTAGCTGG CGCTTTACGA AGCTGGCGAC GTCGGTGGCG
CAGGTGCAGT TCACGTCTGC GCCCAACAAG CTGGCCAGCG CCACGGCCGC CGGCATCACC
AACGTCACAC AGGTGGCTGC GGATGACGGT TCGGGCAAGG GCTTGGCGGT GTACCAGATC
GACCTGACGC AGTAA
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| Protein sequence | MRVRPLCSAA LPLAVFLSMS LAACGGSDDT PTTPAASAAP AGTKATLAVL ETTDLHTNVL
SYDYFKLAVD NSLGFERVAT LINQARAQFP NTLLLDNGDT IQGTALSDYQ AMVSPVTCDQ
TLAIYKVMNA AKFDGGGIGN HEFNYGLPYL SQVTGNTFNV DGLPDPATQK KCAGPAFPQV
LANVVSAKTN APLFQPYTII TKTVTATAPD GSTISAPVKI GIISFTPPTI TSWDKRWLDG
KVYTVGIKET AAKYIPEMRA NGADLVVAIS HGGLDNSTYS PTMENGSWWL STVPGIDAML
IGHSHQLFPD AKSTVSQFNL PGVDKVAGTV NGVPTVMANY WGKHLGVIKL GLTFNGTNWV
VDKTQTTVEA RSIQNADKTY VAADPTVSAA IATEHQATIN YVKTPVGSTD FNMSTYFADV
GDPGAIEIVN QAQAQYVSDY VQANLPQYAS LPVLSVSAPF KSGFGGGTDF TDVAAGPLAI
NNAADLYLYP NTVYAVKVAG SDIKNWLETA AKRFNTIDPT QATVQKLVST FPGYNFDMFT
TPDLTYEIDV TQPVGSRIKN LMYKGVALDP AAQFIVATNN YRASGGGNFP GLDGSKTIYA
SPDANRDVLI SYIKKIGSVK RATNGSQRSW RFTKLATSVA QVQFTSAPNK LASATAAGIT
NVTQVAADDG SGKGLAVYQI DLTQ
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