Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3215 |
Symbol | |
ID | 8020899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3397838 |
End bp | 3398707 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832011 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002983154 |
Protein GI | 241664794 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAG CCCCCGCACA GGTCACCGCC CATCCAGCGC TGGAAAGCCG CCAGCGCATG AAGGACGGCA CTGAACTGCT GGTCCGCACC TGGTTGCCCG CGCCCGACAC CGGCGAGCCG CGCGGCACCG TCATCCTGGT TCACGGCATG GCCGAACACA GCGGCCGCTA TCCGCATGTG GCCAAGGTGC TCACCGACCT GGGCTTGCGC GTACGTGCCT TCGACCTGCG GGGCCACGGC AAGAGCGGCG GCCCGCGCAT GGCGCTCGAC GCGCAAGACA ACTACCTCAC CGATCTCGCC GAAATCGTCG ATGCCGCCGT CGCCGAATGG CACGAGATGC CGTTCGTGCT CGGCCACAGC ATGGGCGGGT TGATCGTCGC GCGCTTCACC ACCGCGCGTA TCCGCCCCGT GCGCGGCGTG CTGCTTTCAT CGCCCGCGCT GCGCGTGAAA TTGCCGCCCG GAACGGGCAT CGTGCGGGGG ATTCTCTCCG CCATTGCGCC GCGGTTGCCG GTGCCGAATC CCGTTGATCC GGCCAAGCTT TCGCACGATC CGAGCATCGC CGCCGCCTAT CGCGCAGACC CGCTGGTGCA GGGCACGATC AGTGCGTCGC TGCTCGAATT CATGCTCAAT GCGATCACGC AGGCGCAGCA GGATGCGCCT CGCCTGGAAG CGCCGATGCT GCTGATGGCC GGTGGCGCGG ATGCGATTGT CGATCCCTCT GGCAGCCGCG ATTTCTATGC GAATGCGCCG GAAGATTTGC GGACCTTGGC GTGGTTCGAC AACGGGTATC ACGAGATCTT CAACGAAGCC GAACCGCTGC GTAGCGAGGT GTTTGGAAAG ATGACGGAGT GGCTGGCTTC GCGGATTTGA
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Protein sequence | MTQAPAQVTA HPALESRQRM KDGTELLVRT WLPAPDTGEP RGTVILVHGM AEHSGRYPHV AKVLTDLGLR VRAFDLRGHG KSGGPRMALD AQDNYLTDLA EIVDAAVAEW HEMPFVLGHS MGGLIVARFT TARIRPVRGV LLSSPALRVK LPPGTGIVRG ILSAIAPRLP VPNPVDPAKL SHDPSIAAAY RADPLVQGTI SASLLEFMLN AITQAQQDAP RLEAPMLLMA GGADAIVDPS GSRDFYANAP EDLRTLAWFD NGYHEIFNEA EPLRSEVFGK MTEWLASRI
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