| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3089 |
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| Symbol | |
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| ID | 8020772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3263160 |
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| End bp | 3263876 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831885 |
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| Product | peptidase C39 bacteriocin processing |
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| Protein accession | YP_002983029 |
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| Protein GI | 241664669 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3271] Predicted double-glycine peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGA ACCGGCAATC GGTGGGCAGG GTGATGTTGT GTCTCTTCTG CGCAGGCAGC
TTGTGGGCAA CGCAGGCCAG TGCCCAGGAG GGCGCGATTG CGTTGCGCGC CGACAGCGAA
ATGCCACTGA ACAAGCCGGT CAAGAGCATG GCGGAGCTGC GCTATCGCAG TGTGATGCGA
CAGCAGCAGG ATTTCAGTTG CGGGGCGGCT GCGGTTGGCA CGTTGCTGCG CTACGGCTAT
GGCTTGGACA TCGATGAGCG CCGCGTCATT GCCGACATGA TGAAAGTGAG CGACCCGAAG
CAGGTCGCCG AGCAAGGGTT CTCCATGCTC GATATGCGCA ACTATGTGCA GACACTCGGC
TTTCGGGGCC GTGGCTACCG TGTGGACATG GCGGCATTGC GCGATCTGGC GATCCCGGTG
ATCGTCTTGT TGAGCTTGAA CGGGTACCAA CATTTCGTGG TCGTCAAGCG CGCGGCCCAG
GGGCGGGTGT TTATCGCCGA CCCTGCACTG GGCAATCGCA TCATGCAGGA GTGGGAATTT
GCGCCTGCGT GGAATGGCCT CGTATTTGCA ATCGTCGGCG ACGTGTCGGT CCAGGCCGAT
TCCGGATTGC TGCAGACGAA TGCTCCCAGC TTGCGTGCGC GTGAGAACGC CGCGTTCTCG
GGAGGGATGC TGCCGATCCA GATGGAATTT GGACCTGCCC GGTGGGACCT GTTCTGA
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| Protein sequence | MRLNRQSVGR VMLCLFCAGS LWATQASAQE GAIALRADSE MPLNKPVKSM AELRYRSVMR
QQQDFSCGAA AVGTLLRYGY GLDIDERRVI ADMMKVSDPK QVAEQGFSML DMRNYVQTLG
FRGRGYRVDM AALRDLAIPV IVLLSLNGYQ HFVVVKRAAQ GRVFIADPAL GNRIMQEWEF
APAWNGLVFA IVGDVSVQAD SGLLQTNAPS LRARENAAFS GGMLPIQMEF GPARWDLF
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