Gene Rpic12D_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3042 
Symbol 
ID8020725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3211174 
End bp3211791 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID644831839 
Productputative signal transduction protein with EFhand domain protein 
Protein accessionYP_002982983 
Protein GI241664623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.6189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA AACGTGCTGT ACAAGCCTTC CTCGCCACCT CGGCCCTGTT CCTCGCCATG 
TCGGGCATGA ACGCCCGGGC CCAGGATGCC AGTGCCCCCG CTGCCAGCGC GCAAGCGCCG
GCGGCGGCCA CGGCACCGGC GGCGCCGCAG AGCGACGCCC GCGCCGGCAA GCCTGGCCAC
CACGGTGGCT TCAAGGCCAT CGACACCAAC GGCGACGGCC AGGTCTCGCG CGACGAGGCC
AAGGGCCACG CGTGGCTTGA AAAGAACTTC GACCAGATCG ATACCAACCA CGATGGCCAA
CTGAGCAAGG ACGAGCTGGC CGCCTGGCAC AAGGCCCACA AGGGCGAGAT GCACGAAAAG
ATGGCGCAGC GCTTCGACGC CAAGTTCAAG GCGGCCGACA AGGACAACGA TGGCAGCCTG
ACCAAGGACG AAGTGCAGGC CGGCATGCCG CGTCTGGCCA AGAACTTCGA CCAGATCGAC
GCCAACCATG ACGGCAAGAT CACCGAAGAC GAGATCCGCG CCTACATGAA GGCCCGTCAC
GACGCCCGCA AGGCGCAGAA GAACACCCCG GCGGCCGCGG CCATGCCCGG TGGCCCGTCG
GCGACGAAGG GCGAGTGA
 
Protein sequence
MTNKRAVQAF LATSALFLAM SGMNARAQDA SAPAASAQAP AAATAPAAPQ SDARAGKPGH 
HGGFKAIDTN GDGQVSRDEA KGHAWLEKNF DQIDTNHDGQ LSKDELAAWH KAHKGEMHEK
MAQRFDAKFK AADKDNDGSL TKDEVQAGMP RLAKNFDQID ANHDGKITED EIRAYMKARH
DARKAQKNTP AAAAMPGGPS ATKGE