Gene Rpic12D_2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2984 
Symbol 
ID8020666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3147283 
End bp3148113 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content60% 
IMG OID644831781 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002982926 
Protein GI241664566 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA ACAACAACAA CGAACACCAG CGCAAGATCG CCCGCGCGAT CACGCTGGCG 
GTGTATGTGG CATTTGCCGT GCTGCCGCTG TACTGGATGC TGAGCATGTC GCTCAAGACC
AACGAGGAGA CGCTGGCCGG CTTCTCGATC TGGCCGAAGC TCGTCACGTT CGACAACTAC
AAGATCATCT TCACCGACCC GTCGTGGTAC TGGGGTTACA TCAACTCCAT CATCTACGTG
ACGATGAACA CGGTGCTCTC GACCGTGGTA GCGCTGCCGG CGGCCTACGC CTTCTCGCGC
TACCGCTTCC TGGGCGACAA GCACATGTTC TTCTGGCTAC TGACGAACCG CATGACGCCG
CCCGCGGTGT TCCTGCTGCC CTTCTTCCAG CTGTATTCGA CGGTCGGCCT GATGGACACG
CACCTGGGCG TGGCGCTGGC GCACATGCTG TTCAACGTGC CACTGGCGGT GTGGATTCTC
GAAGGCTTCA TGTCGGGCAT CCCGCGTGAG ATTGACGAGA CGGCCTACAT CGACGGCTAC
AGCTTCCCCA AGTTCTTCCT AAAGATCTTC CTGCCCCTCA TCAAGGCAGG CGTGGGTGTG
ACTGCGTTCT TCTGCTTCAT GTTCAGCTGG GTGGAACTGC TGCTCGCGCG CACGCTCACC
TCGGTCGATG CCAAACCCAT CACCGCGGTG ATGACGCGCA CGGTGTCGGC CTCGGGCATG
GATTGGGGCG TGCTGGCTGC AGCCGGTGTG CTGACGATCA TTCCGGGTGC GCTGGTGATC
TGGTTTGTGC GGAACTACAT CGCGAAGGGT TTCGCGATGG GCCGCGTCTA A
 
Protein sequence
MPKNNNNEHQ RKIARAITLA VYVAFAVLPL YWMLSMSLKT NEETLAGFSI WPKLVTFDNY 
KIIFTDPSWY WGYINSIIYV TMNTVLSTVV ALPAAYAFSR YRFLGDKHMF FWLLTNRMTP
PAVFLLPFFQ LYSTVGLMDT HLGVALAHML FNVPLAVWIL EGFMSGIPRE IDETAYIDGY
SFPKFFLKIF LPLIKAGVGV TAFFCFMFSW VELLLARTLT SVDAKPITAV MTRTVSASGM
DWGVLAAAGV LTIIPGALVI WFVRNYIAKG FAMGRV