| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2979 |
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| Symbol | |
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| ID | 8020661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3141638 |
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| End bp | 3142411 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644831776 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_002982921 |
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| Protein GI | 241664561 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.50447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.977185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCGC GACACCGCCA GATCCTCGAA TACGTCCGTC AACACGGCGA TGCCTCCGTC
GATGCGCTCG CCCGCGTGCT GGGCGTCACG ACGCAAACCA TCCGTCGCGA TATCCGGCAG
CTCGAAGACG AGCGCCTGCT CGCGCGCTAC CACGGCGGCG TCGGCCTGCC GTCGTCGGTC
GAAAACATCG ATTACGACCA GCGCCAGGTT CTGCACATCG ACGCCAAGCG CCGCATCGCC
GAAGTCGTCG CGCGCCATGT CGAGCCTGGC CGCTCGCTCA TCATCAATAT CGGTACCACG
ACCGAAGAGG TTTCCAAGGC GCTCGTCGGC CCGAATGGCC CGCGTGGCTT GCGCGTCATC
ACCAATAACC TGAACGTCGC GTCGATTCTT TCCGGCAGCC CGGACGCCGA AGTCATCGTT
GCCGGCGGTC TCGTGCGCAA CCGCGACCGC GGCATCGTCG GCGAAGCCAC GATCGACTTC
ATGAAGCAGT TCCGCGTCGA CATCGGCATC ATCGGCGTCT CCAGCATCGA CGAAGACGGC
ACGCTGCTCG ACTACGACTA CCGTGAAGTC CGCGTCGCCC AGTCCATCAT CGAGCAGTCG
CGCGAAGTCT GGCTCGTGGC CGATCACTCC AAGTTTGGCC GCCGCGCAGT CGTCCGTCTG
GGCCATGTCT CGCAGATCGA CAAGTTCTTC ACCGACATCC CCGTGCCGGA GCCAATGGCC
GAAGTCCTCC GCGCCGCCGA GGTCGACGTG ATCGTCGCCA GCGAAACGCG CTGA
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| Protein sequence | MLPRHRQILE YVRQHGDASV DALARVLGVT TQTIRRDIRQ LEDERLLARY HGGVGLPSSV
ENIDYDQRQV LHIDAKRRIA EVVARHVEPG RSLIINIGTT TEEVSKALVG PNGPRGLRVI
TNNLNVASIL SGSPDAEVIV AGGLVRNRDR GIVGEATIDF MKQFRVDIGI IGVSSIDEDG
TLLDYDYREV RVAQSIIEQS REVWLVADHS KFGRRAVVRL GHVSQIDKFF TDIPVPEPMA
EVLRAAEVDV IVASETR
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