Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2970 |
Symbol | rplA |
ID | 8020642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3128066 |
End bp | 3128761 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831757 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_002982912 |
Protein GI | 241664552 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.48267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA TTTCGAAGCG TGCGGCCGCG AACAAGGCCA AGGTCGAACG TACCAAGTTC TACCCGATCG ACGAAGCGCT GAGCCTCGTT AAGGAATGCG CCAGCGCCAA GTTCGATGAG TCCATCGATG TGGCTGTGCA ACTGGGCATC GATGCGAAGA AGTCGGACCA AGTGGTTCGT GGTTCGGTGG TGCTGCCTGC GGGTACCGGC AAGTCGGTGC GCGTGGCTGT GTTCGCACAA GGCGACAAGG CCGAGCAAGC CAAGGCTGCT GGCGCTGAGA TCGTCGGCAT GGAAGACCTC GCCGAGCAGA TCAAGGCTGG CAAGATGGAC TTCGACGTCG TGATCGCCTC GCCGGACACG ATGCGCGTGG TCGGTACGCT GGGTCAGATC CTGGGCCCGC GCGGCCTGAT GCCGAACCCG AAGGTCGGCA CCGTGACGCC GGACGTTGCC ACGGCTGTGA AGAACGCCAA GGCGGGTCAG GTGCAATTCC GTGTCGACAA GGCCGGTATC ATCCACGCCA CCATCGGCCG CCGCTCGTTC GAGCCGGCAG CATTGAAGAG CAACCTGGCT GCATTGCTGG ACGCTCTGAC CAAGGCCAAG CCGGCGTCGA GCAAGGGCGT GTACCTGCGC AAGGTCGCGG TCTCGTCGAC GATGGGCGTG GGCGTGCGTG TTGACCAGGC AACCCTGGCT GCCTGA
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Protein sequence | MAKISKRAAA NKAKVERTKF YPIDEALSLV KECASAKFDE SIDVAVQLGI DAKKSDQVVR GSVVLPAGTG KSVRVAVFAQ GDKAEQAKAA GAEIVGMEDL AEQIKAGKMD FDVVIASPDT MRVVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRRSF EPAALKSNLA ALLDALTKAK PASSKGVYLR KVAVSSTMGV GVRVDQATLA A
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