Gene Rpic12D_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2959 
Symbol 
ID8020631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3106237 
End bp3106827 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID644831746 
ProductMethyltransferase type 12 
Protein accessionYP_002982901 
Protein GI241664541 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0135677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCC AGACTGTTGC CGCCTACGAC ACCCTCGCCG AAACCTTCGC GCAGGAGTGG 
CGCGATCAGC CGGCGCCTGA AGACCTGTAT GCGTTGCTGC GCCGTGAGTT CAAGGCAGGC
GGCGCCACCG CCGACATCGG CTGCGGCGCG GGCCGCGAGG TGGCGTGGCT CAACGCCAAT
GGGTATCCCG CCGTCGGCTA CGACGCCTCC GCCGGGTTGC TCGAAGCCGC GCGCGAGCAG
TATCCGGGGC TGTCGTTTCG GCAGGCGCTG CTGCCCGAGT TGGTCGGTAT TGCCGAAGGC
GCGTTCGACA ACGTCCTCTG CGAGACGGTC ATCATGCATC TGCCGCCCGA GCAGATTGGC
GCGTCGGTGG AGCGCCTGGT GTCGTTGCTG CGCCCGGGCG GCACGCTGTA CCTGAGCTGG
CGCGTCACGC CTGAGGCGGA TCAGCGCGAT GGGCGCGGCA GGCTCTTCAC GTCGTTCGAT
GCGGCGCCCG TGCGCGAGGC GCTGGCCGGC ACTGAGGTGG TTTTCGACGA AGCGGCTGTC
AGCCAGTCAT CGGGGCGGAC GATCCATCGC ATCGTTGCGC GCACGGTCTG A
 
Protein sequence
MDSQTVAAYD TLAETFAQEW RDQPAPEDLY ALLRREFKAG GATADIGCGA GREVAWLNAN 
GYPAVGYDAS AGLLEAAREQ YPGLSFRQAL LPELVGIAEG AFDNVLCETV IMHLPPEQIG
ASVERLVSLL RPGGTLYLSW RVTPEADQRD GRGRLFTSFD AAPVREALAG TEVVFDEAAV
SQSSGRTIHR IVARTV