Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2959 |
Symbol | |
ID | 8020631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3106237 |
End bp | 3106827 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831746 |
Product | Methyltransferase type 12 |
Protein accession | YP_002982901 |
Protein GI | 241664541 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0135677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCC AGACTGTTGC CGCCTACGAC ACCCTCGCCG AAACCTTCGC GCAGGAGTGG CGCGATCAGC CGGCGCCTGA AGACCTGTAT GCGTTGCTGC GCCGTGAGTT CAAGGCAGGC GGCGCCACCG CCGACATCGG CTGCGGCGCG GGCCGCGAGG TGGCGTGGCT CAACGCCAAT GGGTATCCCG CCGTCGGCTA CGACGCCTCC GCCGGGTTGC TCGAAGCCGC GCGCGAGCAG TATCCGGGGC TGTCGTTTCG GCAGGCGCTG CTGCCCGAGT TGGTCGGTAT TGCCGAAGGC GCGTTCGACA ACGTCCTCTG CGAGACGGTC ATCATGCATC TGCCGCCCGA GCAGATTGGC GCGTCGGTGG AGCGCCTGGT GTCGTTGCTG CGCCCGGGCG GCACGCTGTA CCTGAGCTGG CGCGTCACGC CTGAGGCGGA TCAGCGCGAT GGGCGCGGCA GGCTCTTCAC GTCGTTCGAT GCGGCGCCCG TGCGCGAGGC GCTGGCCGGC ACTGAGGTGG TTTTCGACGA AGCGGCTGTC AGCCAGTCAT CGGGGCGGAC GATCCATCGC ATCGTTGCGC GCACGGTCTG A
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Protein sequence | MDSQTVAAYD TLAETFAQEW RDQPAPEDLY ALLRREFKAG GATADIGCGA GREVAWLNAN GYPAVGYDAS AGLLEAAREQ YPGLSFRQAL LPELVGIAEG AFDNVLCETV IMHLPPEQIG ASVERLVSLL RPGGTLYLSW RVTPEADQRD GRGRLFTSFD AAPVREALAG TEVVFDEAAV SQSSGRTIHR IVARTV
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