| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2950 |
|---|
| Symbol | rplC |
|---|
| ID | 8020622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3095714 |
|---|
| End bp | 3096367 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644831737 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_002982892 |
|---|
| Protein GI | 241664532 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000276942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000134206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG GCCTTGTAGG TCGCAAGGTT GGCATGACCC GTATTTTCAC GGACGACGGC
GATTCGATTC CCGTCACCGT GCTCGAGGTC GGCGACAACC GCGTGACGCA AATCAAGACG
GACGAGACCG ACGGTTATAC CGCGGTTCAA GTCACCTTCG GCACCCGACG CGCCAGCCGC
GTCACCAAGC CGCTGGCGGG TCATCTCGCC AAAGCCGGCG TGGAAGCGGG CGAAGTCATC
AAAGAATTCC GAGTGGATGC CGCTCGTGCC GCTGAATTCC AGCCTGGCGC GAACATCAGC
GTCGACCTGT TCGAAGTCGG TCAGAAGATC GACGTCCAGG GTGTGACGAT TGGTAAGGGC
TACGCCGGTA CCATCAAGCG CTACAACTTC TCGTCGGGCC GCGCCTCGCA CGGTAACTCG
CGCTCGCACA ACGTGCCGGG CTCGATCGGT ATGGCGCAGG ATCCGGGCCG CGTGTTCCCG
GGTAAGCGCA TGACCGGTCA CATGGGTGAC GTCACCCGTA CCGTCCAGAA TCTGGAAATC
GCCAAGATCG ACGCAGAGCG CAAGCTGCTG CTGGTCAAGG GTGCGATTCC GGGCGCCAAG
GGCGGTCAAG TCATCGTCAC GCCGGCCGTG AAGGCCCGCG CCAAGAAGGC ATAA
|
|---|
| Protein sequence | MSLGLVGRKV GMTRIFTDDG DSIPVTVLEV GDNRVTQIKT DETDGYTAVQ VTFGTRRASR
VTKPLAGHLA KAGVEAGEVI KEFRVDAARA AEFQPGANIS VDLFEVGQKI DVQGVTIGKG
YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD VTRTVQNLEI
AKIDAERKLL LVKGAIPGAK GGQVIVTPAV KARAKKA
|
|---|
| |