Gene Rpic12D_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2947 
SymbolrplB 
ID8020619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3093938 
End bp3094768 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID644831734 
Product50S ribosomal protein L2 
Protein accessionYP_002982889 
Protein GI241664529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0126826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000017325 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCACTCG TCAAAACCAA GCCGACATCG CCGGGCCGCC GCTCGATGGT GAAGGTCGTT 
AACCCCGACC TTCACAAGGG CGCGCCGCAC GGTCCGCTGC TGGAAAAGCA AATCCAGAAG
TCGGGTCGTA ACAACAACGG CCACATCACT ACCCGTCACA AGGGCGGTGG TCACAAGCAT
CACTATCGCA TCGTCGATTT CAAGCGTAAC GACAAGGACG GTATCCCGGC CAAGATCGAA
CGCCTGGAAT ACGACCCGAA CCGTAGCGCC AACATCGCGC TCGTGCTGTT CGCTGACGGC
GAACGCCGCT ACATCATCGC CCCGAAGGGC GCTGTGGTTG GCCAAGCCAT CGCCAACGGC
TCGGAAGCGC CGATCAAGGC CGGTAACAAC CTGCCGATCC GCAACATCCC TGTCGGTACG
ACGATCCACT GCGTGGAAAT CCTGCCGGGC AAGGGCGCTC AAGTTGCCCG TTCGGCCGGT
ACGTCCGCCG TGCTGCTGGC TCGCGAAGGC ATCTACGCTC AAGTGCGTCT GCGCTCGGGT
GAAGTGCGCC GCGTGCACAT TGAGTGCCGC GCGACCATTG GTGAAGTCGG CAACGAAGAG
CACAGCCTGC GCCAGATCGG CAAGGCCGGT GCAACCCGTT GGCGCGGTAT TCGCCCGACC
GTTCGCGGTG TGGTGATGAA CCCGGTCGAT CACCCGCATG GTGGTGGTGA AGGTAAGACT
GCTGCTGGCC GTGATCCGGT GTCCCCGTGG GGTACGCCGA CCAAGGGCTA CCGCACCCGT
CGTAACAAGC GCACTGACAG CATGATCGTT CAGCGCCGTC ACAAGCGTTA A
 
Protein sequence
MALVKTKPTS PGRRSMVKVV NPDLHKGAPH GPLLEKQIQK SGRNNNGHIT TRHKGGGHKH 
HYRIVDFKRN DKDGIPAKIE RLEYDPNRSA NIALVLFADG ERRYIIAPKG AVVGQAIANG
SEAPIKAGNN LPIRNIPVGT TIHCVEILPG KGAQVARSAG TSAVLLAREG IYAQVRLRSG
EVRRVHIECR ATIGEVGNEE HSLRQIGKAG ATRWRGIRPT VRGVVMNPVD HPHGGGEGKT
AAGRDPVSPW GTPTKGYRTR RNKRTDSMIV QRRHKR