Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2947 |
Symbol | rplB |
ID | 8020619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3093938 |
End bp | 3094768 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644831734 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_002982889 |
Protein GI | 241664529 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0126826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000017325 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCACTCG TCAAAACCAA GCCGACATCG CCGGGCCGCC GCTCGATGGT GAAGGTCGTT AACCCCGACC TTCACAAGGG CGCGCCGCAC GGTCCGCTGC TGGAAAAGCA AATCCAGAAG TCGGGTCGTA ACAACAACGG CCACATCACT ACCCGTCACA AGGGCGGTGG TCACAAGCAT CACTATCGCA TCGTCGATTT CAAGCGTAAC GACAAGGACG GTATCCCGGC CAAGATCGAA CGCCTGGAAT ACGACCCGAA CCGTAGCGCC AACATCGCGC TCGTGCTGTT CGCTGACGGC GAACGCCGCT ACATCATCGC CCCGAAGGGC GCTGTGGTTG GCCAAGCCAT CGCCAACGGC TCGGAAGCGC CGATCAAGGC CGGTAACAAC CTGCCGATCC GCAACATCCC TGTCGGTACG ACGATCCACT GCGTGGAAAT CCTGCCGGGC AAGGGCGCTC AAGTTGCCCG TTCGGCCGGT ACGTCCGCCG TGCTGCTGGC TCGCGAAGGC ATCTACGCTC AAGTGCGTCT GCGCTCGGGT GAAGTGCGCC GCGTGCACAT TGAGTGCCGC GCGACCATTG GTGAAGTCGG CAACGAAGAG CACAGCCTGC GCCAGATCGG CAAGGCCGGT GCAACCCGTT GGCGCGGTAT TCGCCCGACC GTTCGCGGTG TGGTGATGAA CCCGGTCGAT CACCCGCATG GTGGTGGTGA AGGTAAGACT GCTGCTGGCC GTGATCCGGT GTCCCCGTGG GGTACGCCGA CCAAGGGCTA CCGCACCCGT CGTAACAAGC GCACTGACAG CATGATCGTT CAGCGCCGTC ACAAGCGTTA A
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Protein sequence | MALVKTKPTS PGRRSMVKVV NPDLHKGAPH GPLLEKQIQK SGRNNNGHIT TRHKGGGHKH HYRIVDFKRN DKDGIPAKIE RLEYDPNRSA NIALVLFADG ERRYIIAPKG AVVGQAIANG SEAPIKAGNN LPIRNIPVGT TIHCVEILPG KGAQVARSAG TSAVLLAREG IYAQVRLRSG EVRRVHIECR ATIGEVGNEE HSLRQIGKAG ATRWRGIRPT VRGVVMNPVD HPHGGGEGKT AAGRDPVSPW GTPTKGYRTR RNKRTDSMIV QRRHKR
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