Gene Rpic12D_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2932 
SymbolrpmD 
ID8020604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3087684 
End bp3087866 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content63% 
IMG OID644831719 
Product50S ribosomal protein L30 
Protein accessionYP_002982874 
Protein GI241664514 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000405636 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCAGA AAACCGTGAA AGTCCAACTC GTGCGCAGCC TGATCGGCAC GCGCGAAGAC 
CACCGCGCCA CGGTGCGCGG CCTGGGCCTG CGCCGCATGA ACTCGGTGTC CGAATTGCAG
GACACGCCCG CAGTGCGCGG CATGATCAAC AAGGTGTCCT ACCTGGTCAA GGTCATCGGC
TAA
 
Protein sequence
MSQKTVKVQL VRSLIGTRED HRATVRGLGL RRMNSVSELQ DTPAVRGMIN KVSYLVKVIG