| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2904 |
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| Symbol | |
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| ID | 8020576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3062251 |
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| End bp | 3062910 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831691 |
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| Product | Pilus assembly protein PilO |
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| Protein accession | YP_002982846 |
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| Protein GI | 241664486 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.048804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCT CGACCGAAAT TTCGTTGGAA GACCTGGTCA GCCAGTTCCG TGGCCTGAAC
CTGAACGAGC CGGAAACGTG GCCGATCGCG CCGCGCATCC TGTTCATGAT TCTCTCTGCC
GTGCTGGTGA TCGGCCTGGG CTGGCAGTTG TATTGGAGCG GCAAGTTCGA CGAGCGCGAC
GCCAAGCGCA CCGAACAGGC CAACCTCAAG TCGGCATACC AGAGCAAGCT TGCGCAAGTA
GTGAATCTGG AAGCGCTGCG CAAGCAGAAG GCTGAGGTCG AGCAGCGTGT CGCTAAGCTC
GAACTGCAAC TGCCCAACAA GACCGAGATG GATGCGCTGC TGGCCGACGT CAACCACGCC
GGTATCGCGC GTGGCCTGAC CTTCGACCTG TTCCGTCCGT CTGGCGCAGT GGTCAAGCCT
TACTACGCCG AGATCCCGGT GGCGGTGAAG GTGAATGGCC GCTATCACGA CATGGCGCTG
TTTGCGGCCG ACGTGGCGGC GCTGTCGCGC ATCGTCACGC TGCAGAACAT CTCGCTGACA
GGCACCAAGG ATGGCAGCAT GGTGATGGAA ACGCGTGCCG AGGCCTACCG GGCACTCGAT
GCCGATGAGC AGGCCGCGCA GCGCAAGGCG AACGCCGCCG CCAAGGGAGG CGCCAAATGA
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| Protein sequence | MALSTEISLE DLVSQFRGLN LNEPETWPIA PRILFMILSA VLVIGLGWQL YWSGKFDERD
AKRTEQANLK SAYQSKLAQV VNLEALRKQK AEVEQRVAKL ELQLPNKTEM DALLADVNHA
GIARGLTFDL FRPSGAVVKP YYAEIPVAVK VNGRYHDMAL FAADVAALSR IVTLQNISLT
GTKDGSMVME TRAEAYRALD ADEQAAQRKA NAAAKGGAK
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