Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2864 |
Symbol | |
ID | 8020536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3021390 |
End bp | 3022532 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831651 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002982806 |
Protein GI | 241664446 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.382668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCA TCCCCAATTC CCGTCGCCGC TGGCTTTGTC AGACCGCCGC ATTGCTGGCT GCAAGCGGCG CCGTCGCGCG CGGGGCGCAC GGGCAATGGC TGGCCCGCCA AGCCCCGGAG CTGCCGTCGT ACTACCCGCG CGATTACGGT GTGATGATCG ACGCCGCGCG TCGCGAAGGC CGTGTCACGG TGTATTCCAC GACGGATTTC TCTGCCGCCT ACCCGCTGAT CCGCGCCTTC GAAACGCGCT ACCCCGGCAT CACCGTCGAC TACCGCGAGC AGAACAGTGA CGATATCTAC CGCCGCTTCC TCGCAGAATT CGCCGCCAAG TCGCCGGGCG CCGATGTGGT CTGGAGCTCG GCCATGCCCG AACAGTTCAA GCTCGTGAAC GACGGCCACG CACTTCCTTA CGCATCGCCC GAGCGGCCTT ACCTGCCATC ATGGGCGATC TGGAAGAACG AGGCGTACGG CACGAGCTAC GAGCCGGTCG TCTTTGTCTA CAACACGCGG CAGCTGCCGC CGGAGTTGAT TCCATCCACC CACGCCGACT TCGCTCGCAT TCTGAATAGC CATCGTGACT TGCTGCGCGG TCGGGTCGCC TCCTACGACA TCGAACACTC CGGCTCCGCC TTCCTGTTCG CCGCCGAAGA TGCGCGCACA ACGCCGGTGT TCTGGGATGT TGCCAAGGCA TTGGGTGGTG TCAACGTCAA CCTGTACATC ACCACGGCCG CGATGCTGGA GCGCGTCGCT TCCGGCGAAA GCCTGCTCGC GTACGACGTG ATCGGATCCT ATGCCGCGCG TTACGCCGAT CGCAATCCGG CGCTCGCCAT CAAGATGCCG ACCGACTACA CGCTGGTCGC GACGCGCGTC GCCTTTATTG CGCGGCGCGC TGCCCGCCCG AACGCCGCGC GCCTCTGGCT CGACTTCATG CTCTCCCGCG ATGGCCAGAG CGTGATGGCA GACCGTGCGT TCTTGTTTTC GCTGCGCCAG GACGTTGAGA CCGGGCTCAC TGCGAAGCGC CTGCTCGCCG AACTGGGAAA CACGCATCGG CCCATTCCCG TTGGCCCGGG TTTACTCGCC CATCAAGATC AGCTCCGCCG TGCCGATTTC CTAAAGCGAT GGCACGCCGC ACTCGGCCGA TAA
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Protein sequence | MSSIPNSRRR WLCQTAALLA ASGAVARGAH GQWLARQAPE LPSYYPRDYG VMIDAARREG RVTVYSTTDF SAAYPLIRAF ETRYPGITVD YREQNSDDIY RRFLAEFAAK SPGADVVWSS AMPEQFKLVN DGHALPYASP ERPYLPSWAI WKNEAYGTSY EPVVFVYNTR QLPPELIPST HADFARILNS HRDLLRGRVA SYDIEHSGSA FLFAAEDART TPVFWDVAKA LGGVNVNLYI TTAAMLERVA SGESLLAYDV IGSYAARYAD RNPALAIKMP TDYTLVATRV AFIARRAARP NAARLWLDFM LSRDGQSVMA DRAFLFSLRQ DVETGLTAKR LLAELGNTHR PIPVGPGLLA HQDQLRRADF LKRWHAALGR
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