Gene Rpic12D_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2864 
Symbol 
ID8020536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3021390 
End bp3022532 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID644831651 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002982806 
Protein GI241664446 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.382668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA TCCCCAATTC CCGTCGCCGC TGGCTTTGTC AGACCGCCGC ATTGCTGGCT 
GCAAGCGGCG CCGTCGCGCG CGGGGCGCAC GGGCAATGGC TGGCCCGCCA AGCCCCGGAG
CTGCCGTCGT ACTACCCGCG CGATTACGGT GTGATGATCG ACGCCGCGCG TCGCGAAGGC
CGTGTCACGG TGTATTCCAC GACGGATTTC TCTGCCGCCT ACCCGCTGAT CCGCGCCTTC
GAAACGCGCT ACCCCGGCAT CACCGTCGAC TACCGCGAGC AGAACAGTGA CGATATCTAC
CGCCGCTTCC TCGCAGAATT CGCCGCCAAG TCGCCGGGCG CCGATGTGGT CTGGAGCTCG
GCCATGCCCG AACAGTTCAA GCTCGTGAAC GACGGCCACG CACTTCCTTA CGCATCGCCC
GAGCGGCCTT ACCTGCCATC ATGGGCGATC TGGAAGAACG AGGCGTACGG CACGAGCTAC
GAGCCGGTCG TCTTTGTCTA CAACACGCGG CAGCTGCCGC CGGAGTTGAT TCCATCCACC
CACGCCGACT TCGCTCGCAT TCTGAATAGC CATCGTGACT TGCTGCGCGG TCGGGTCGCC
TCCTACGACA TCGAACACTC CGGCTCCGCC TTCCTGTTCG CCGCCGAAGA TGCGCGCACA
ACGCCGGTGT TCTGGGATGT TGCCAAGGCA TTGGGTGGTG TCAACGTCAA CCTGTACATC
ACCACGGCCG CGATGCTGGA GCGCGTCGCT TCCGGCGAAA GCCTGCTCGC GTACGACGTG
ATCGGATCCT ATGCCGCGCG TTACGCCGAT CGCAATCCGG CGCTCGCCAT CAAGATGCCG
ACCGACTACA CGCTGGTCGC GACGCGCGTC GCCTTTATTG CGCGGCGCGC TGCCCGCCCG
AACGCCGCGC GCCTCTGGCT CGACTTCATG CTCTCCCGCG ATGGCCAGAG CGTGATGGCA
GACCGTGCGT TCTTGTTTTC GCTGCGCCAG GACGTTGAGA CCGGGCTCAC TGCGAAGCGC
CTGCTCGCCG AACTGGGAAA CACGCATCGG CCCATTCCCG TTGGCCCGGG TTTACTCGCC
CATCAAGATC AGCTCCGCCG TGCCGATTTC CTAAAGCGAT GGCACGCCGC ACTCGGCCGA
TAA
 
Protein sequence
MSSIPNSRRR WLCQTAALLA ASGAVARGAH GQWLARQAPE LPSYYPRDYG VMIDAARREG 
RVTVYSTTDF SAAYPLIRAF ETRYPGITVD YREQNSDDIY RRFLAEFAAK SPGADVVWSS
AMPEQFKLVN DGHALPYASP ERPYLPSWAI WKNEAYGTSY EPVVFVYNTR QLPPELIPST
HADFARILNS HRDLLRGRVA SYDIEHSGSA FLFAAEDART TPVFWDVAKA LGGVNVNLYI
TTAAMLERVA SGESLLAYDV IGSYAARYAD RNPALAIKMP TDYTLVATRV AFIARRAARP
NAARLWLDFM LSRDGQSVMA DRAFLFSLRQ DVETGLTAKR LLAELGNTHR PIPVGPGLLA
HQDQLRRADF LKRWHAALGR