Gene Rpic12D_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2857 
Symbol 
ID8020529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3014029 
End bp3014772 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID644831644 
Productcytochrome c1 
Protein accessionYP_002982799 
Protein GI241664439 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.453799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TGCTTGCGAT TTTCGCCTTG GCCGGTCTCG TGTTTGCCGC GCCCGTGATG 
GCCAATGAGG GCGGCGTGCC GCTCGATCCG GCGCCCAACC AGTCCAGCGA CACGTCTGCA
CTGCAGCGCG GCGCCAAGCT ATTCGTCAAC TATTGCCTGA ACTGCCACGG CGCCAGCGCC
ATGCGCTACA ACCGTCTGCG CGACATCGGT TTGACCGAGG AGCAGATCAA GCAGAACCTG
CTGTTCACAT CAGACAAGGT TGGCGACACG ATGCACATCG CCATGGACCG CGAGGACGCC
AAGAAGTGGT TTGGCGCCGT ACCGCCGGAC CTGTCGGTGA TCGCCCGCGC GCGCGGCAGC
GACTGGCTCT ACACCTACCT GCGCACGTTC TACCGAGACG ACACGCGTCC GACCGGCTGG
AACAACCTTG TCTTCGACAA GGTTGGCATG CCGCATGTGC TGTGGGAGCT GCAAGGCCAG
CAAGTGCCGA AGTACGCCGA AGTGAAGTCC GAGCACGGCG AGGCCGAGAA GAAGCTCGTT
GGCCTTGAGA TATCGGTGCC GGGCAAGATG AACAAGGTCG AATTTGACCA GGCGGTGGCC
GATCTGGTCA GCTATCTGGA CTGGATGGCG GAGCCCGCTG GCAACCTGCG CAAGCGTCTC
GGCGTCTGGG TACTGTTGTT CATTGGCGTG TTCTTCGTGC TGGCCTGGCG CCTGAATGCG
GCCTATTGGA AGGACATCAA GTAA
 
Protein sequence
MKKLLAIFAL AGLVFAAPVM ANEGGVPLDP APNQSSDTSA LQRGAKLFVN YCLNCHGASA 
MRYNRLRDIG LTEEQIKQNL LFTSDKVGDT MHIAMDREDA KKWFGAVPPD LSVIARARGS
DWLYTYLRTF YRDDTRPTGW NNLVFDKVGM PHVLWELQGQ QVPKYAEVKS EHGEAEKKLV
GLEISVPGKM NKVEFDQAVA DLVSYLDWMA EPAGNLRKRL GVWVLLFIGV FFVLAWRLNA
AYWKDIK