Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2820 |
Symbol | |
ID | 8020491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2987600 |
End bp | 2988514 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831606 |
Product | Integrase catalytic region |
Protein accession | YP_002982762 |
Protein GI | 241664402 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGAACT ACATCGACCG CCACCGTGAC GACTACGGGG TCGAGCCCAT CTGCCGGGTG CTGCAGATGG CCCCGTCGTG TTACTGGCGC CACGCAGCCC GGCTGCGTAA CCCGCAACTG CGCAGTCAAC GCGCCCAGCG TGACGAGTGC TTGAAGGCGG ACATCCAGCG CGTGTGGCAT GCCAACTGGC AGGTCTACGG GGCCGATAAG GTCTGGCTGC AGATGAACCG CGAGGGCATC CCGGTGGCAC GTTGTACTGT GGAGCGACTG ATGCGTGCCA TGGGCTTGCA AGGGGCTCGC CGTGGCAGGG CGGTACGTAC CACCACGCCT GACACATCAG CGCCGTGCCC GCTGGACCAC GTCAACCGGC ACTTCAAGGC CAGCCGTCCC AACGAGCTAT GGGTGTCGGA CTTCACCTAT GTCTCCACCT GGCAGGGCTG GCTGTATGTG GCCTTTGTTG TGGACGTGTA TGCCCGGCGC ATCGTGGGCT GGCGAGTCAG CCGCAGCATG CAAACGGACT TCGTGCTGGA TGCGCTGGAG CAGGCGCTGT ATGACCGCCA GCCAGCAGCC CATGCCTTGA CGCACCATTC CGACAGGGGC AGTCAATACG TCAGCATCCG CTACACCGAA CGGCTGGACC AGGCGGGCAT ACAGCCCTCG GTGGGCAGCC GGGGTGACAG CTACGACAAC GCGCTGGCCG AGACCATCAA CGGTCTGTAC AAGGCCGAGC TGATTCACCG CCGGGGACCC TGGAAGACCA GGGAATCCGT GGAACTGGCC ACCCTGCAAT GGGTGCACTG GTTCAACCAT GTCCGATTGC TCACGCCGAT TGGGGGCATC CCTCCGGCAG AAGCTGAGGC AAACTACTGG AGGCAACTAG CCGTCAGCGA CACCTCGGCA GAGGTGTCAA CTTAA
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Protein sequence | MKNYIDRHRD DYGVEPICRV LQMAPSCYWR HAARLRNPQL RSQRAQRDEC LKADIQRVWH ANWQVYGADK VWLQMNREGI PVARCTVERL MRAMGLQGAR RGRAVRTTTP DTSAPCPLDH VNRHFKASRP NELWVSDFTY VSTWQGWLYV AFVVDVYARR IVGWRVSRSM QTDFVLDALE QALYDRQPAA HALTHHSDRG SQYVSIRYTE RLDQAGIQPS VGSRGDSYDN ALAETINGLY KAELIHRRGP WKTRESVELA TLQWVHWFNH VRLLTPIGGI PPAEAEANYW RQLAVSDTSA EVST
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