Gene Rpic12D_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2774 
Symbol 
ID8020445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2937598 
End bp2938689 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID644831561 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002982717 
Protein GI241664357 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.97205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC AATGCGGCAT CGTCGGTCTG CCGAACGTCG GTAAGTCGAC CCTGTTCAAT 
GCCCTGACCA AAGCCGGCAT CGCCGCCGAG AACTACCCGT TCTGCACGAT CGAGCCCAAC
GTCGGCGTGG TGGAAGTGCC GGACGCCCGT CTGCAGGCAC TGGCCGACAT CGTCAAGCCC
GAGCGGGTGC TGCCGGCGGT GGTCGAGTTC GTCGATATTG CAGGCCTCGT GGCGGGCGCC
TCCAAAGGGG AAGGCCTGGG CAACCAGTTC CTGGCCAACA TCCGTGAGAC GGATGCCATC
ACGCACGTGG TGCGCTGTTT CGAAGATGAA AACGTGATTC ACGTTGCCGG CAAGGTCGAC
CCGATCGCTG ACATCGAAGT CATCAACACC GAACTGGCCC TCGCTGACCT GGCTACGGTG
GAAAAGGCGC TGCAGCGCTA CACCAAGGCC GCCAAGTCGG GCAACGACAA GGAAGCCGCC
AAGCTGGTCG CCGTGCTGGA AAAAGCGCAG AAGGTTCTGG ACGAAGCCAA GCCAGTGCGC
GGCCTGAACC TGACCGACGA CGAGTGGGCG ACGCTCAAGC CGCTGTGCCT GATCACCGCC
AAGCCGACCA TGTACGTTGC CAACGTGCGC GAAGACGGCT TCGAGAACAA CCCGCACCTC
GACGCGGTGC GCAACTACGC CGCGCAGACG AATTCGCCGG TGGTGGCCGT GTGCGCCGCC
ATCGAAGCCG AAATCGCAGA CCTGGATGAC GCTGACAAGG CCGAATTCCT GGCCGACATC
GGGATGGAGG AGCCGGGCCT GAACCGCGTG ATCCGTGCCG CCTTCAAGCT GCTCGGCCTG
CAAACCTACT TCACCGCCGG CGTGAAGGAA GTGCGCGCCT GGACGATCCA TATCGGCGAC
ACAGCCCCTC GCGCAGCTGC GGCCATCCAC ACCGACTTTG AACGCGGCTT CATCCGCGCC
CAGACAATCT CGTACGAGGA TTACATCCAG TACAAGGGCG AACAGGGTGC CAAGGAAGCC
GGCAAGATGC GTGCGGAAGG CAAGGAATAC ATTGTCAAAG ACGGCGATGT ACTGCACTTC
CTGTTCCATT AA
 
Protein sequence
MSLQCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVEVPDAR LQALADIVKP 
ERVLPAVVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI THVVRCFEDE NVIHVAGKVD
PIADIEVINT ELALADLATV EKALQRYTKA AKSGNDKEAA KLVAVLEKAQ KVLDEAKPVR
GLNLTDDEWA TLKPLCLITA KPTMYVANVR EDGFENNPHL DAVRNYAAQT NSPVVAVCAA
IEAEIADLDD ADKAEFLADI GMEEPGLNRV IRAAFKLLGL QTYFTAGVKE VRAWTIHIGD
TAPRAAAAIH TDFERGFIRA QTISYEDYIQ YKGEQGAKEA GKMRAEGKEY IVKDGDVLHF
LFH