Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2745 |
Symbol | |
ID | 8020410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2902402 |
End bp | 2904117 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831526 |
Product | PTS system, fructose subfamily, IIC subunit |
Protein accession | YP_002982688 |
Protein GI | 241664328 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.853205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACC TGCTGGCAAT TCTCGGTGCA GACGGCCGCA CCACCCGCGC GATGCTCGCC GGCGCAGCCC TGCGCCACGC GGCGCGCGAA TCCGGCTACA AGCTCGACGT CGACGTGCGC GGCCCGGACA CCGCCTCGGT CGTCGACACG GCGGCCCTGG CCACCGCCAA AGCCGTTGTC TGGGCGGGCC TGTCGCCAGA TGCCGCCGCC CGTGACGCCA ATCCGCGTAC GCTTGAAGTC ACACTTGACG AGGTGCTCGC CGACGCCCGC GCCGTACTGG CCCGCGTGAT GCATAGCGCC TCGCTCGCGC CAGAATCCGC TACCCAAGCT CGGCGCATTG TCGCCATCAC GTCGTGCCCG ACCGGCATCG CGCACACCTT CATGGCTGCC GAGGCGCTCA CGCAGGCCGC CGGCGCGCTC GGTCACACGA TCCACGTGGA AACGCAGGGT TCGGTGGGCG CACAGAACAC GCTGTCGGCC GATGCCATCG CAACCGCAGA CCTCGTGCTG ATCGCGGCCG ACACGCAAGT CGACCTGTCA CGCTTTGCCG GCAAGCGCGT CTTCCGCGCC GGCACCAAGG CGGCCATCCA CGATGGGCAG GCATTGATCC GCCGGGCCTT CGACGAAGCC TCGCTAGAAG GCGCGGGGAC GGCGCAATTG GCGGGCACCG CGGCCGCCGC GGCTGAACAG CAGCGCACCG GCCCGTACAA GCACCTGATG ACTGGTGTGT CGTTCATGCT GCCCTTCGTG GTGGCGGGGG GCATCCTGAT TGCACTGGCG TTCGCCCTCG GCGGCATCTA CGTGACGGAC GCCTCGGCCA GCCATACGCT TGGCGGCGCG CTGTTCCAGA TCGGTGCCAA GTCCGCGTTT GCCTTGATGG TGCCCGTGCT CGCCGGATAC ATCGCGTATT CGATCGCCAG CCGGCCGGGC ATCGCACCCG GGATGGTCGG AGGCATGCTC GCCGCCAGCC TGGGCGCCGG GTTTCTTGGT GGCATCGTGG CCGGTTTCGT CGCCGGCTAT GGCACCGAGG CGCTCAACCG CTGGCTGAAG CTGCCGCGCA ACCTGGAAGG GCTGAAACCG GTGCTGATCC TGCCCGTGCT CGGGTGCCTT TTGACGGGCT TGGTGATGCT GTATGTGGTG GGCGCGCCGG TTGCTGCGCT GCTTGCATCC CTGACGACCT GGCTGCGCGG CATGCAAGGC GCGAACGCGG TCCCGCTGGG CGCGCTGCTG GGCGGCATGA TGGCGTTTGA CATGGGCGGC CCCATCAACA AGGCTGCGTA TGCCTTCAGC ACCGGGCTGA TCGGCGCGCA GGTCTACACG CCGATGGCGG CCACGATGGC CGCAGGCATG ACGCCGCCGT TGGGTATCGC GCTCGCGGCA TGGCTCTTCC CGTCGCGATT CACGCGGGAC GAACGCCAGG CGGCGCGCCC CACCGCCGTG CTCGGCCTCG CCTTCATCAG CGAGGGCGCG ATCCCGTATG CCGCGCGCGA CCCGTTCCGC GTGATTCCCG CGCTGGTGAC GGGTTCCGCG TGCGCGGGTG CCCTGTCAAT GTTGTTCGGG GTGGAACTGC GCGTGCCGCA CGGCGGGGCA TTCGTGCTGC CGATCCCGAA CGCGGTAACG CACCTGGGCG GCTATGTTGC AGCGCTGGTT GCCGGCACCG TCGTCACCGC CGTGCTGCTG GCAGTGATGA AGCGGCGGGT GGCGGAAGCC GCCTGA
|
Protein sequence | MANLLAILGA DGRTTRAMLA GAALRHAARE SGYKLDVDVR GPDTASVVDT AALATAKAVV WAGLSPDAAA RDANPRTLEV TLDEVLADAR AVLARVMHSA SLAPESATQA RRIVAITSCP TGIAHTFMAA EALTQAAGAL GHTIHVETQG SVGAQNTLSA DAIATADLVL IAADTQVDLS RFAGKRVFRA GTKAAIHDGQ ALIRRAFDEA SLEGAGTAQL AGTAAAAAEQ QRTGPYKHLM TGVSFMLPFV VAGGILIALA FALGGIYVTD ASASHTLGGA LFQIGAKSAF ALMVPVLAGY IAYSIASRPG IAPGMVGGML AASLGAGFLG GIVAGFVAGY GTEALNRWLK LPRNLEGLKP VLILPVLGCL LTGLVMLYVV GAPVAALLAS LTTWLRGMQG ANAVPLGALL GGMMAFDMGG PINKAAYAFS TGLIGAQVYT PMAATMAAGM TPPLGIALAA WLFPSRFTRD ERQAARPTAV LGLAFISEGA IPYAARDPFR VIPALVTGSA CAGALSMLFG VELRVPHGGA FVLPIPNAVT HLGGYVAALV AGTVVTAVLL AVMKRRVAEA A
|
| |