| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2671 |
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| Symbol | |
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| ID | 8020336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2819749 |
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| End bp | 2822598 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831452 |
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| Product | helicase domain protein |
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| Protein accession | YP_002982614 |
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| Protein GI | 241664254 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.672635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTC AAGCATCATT TCAGCCGGGT AGTCTTGTTT CCGCCCGTGG TCGTGAATGG
ATTGTTCTTC CGCAGTCATC CACCGATACG CTGTATCTTC GACCTCTTGG CGCAGCTGAA
GACGACGCAA CGCTCATCTA CCTGCCAATC GAGCTCCATC CGGTCGGCCC TGCGACATTC
CCGTGGCCTC GGATAGAGCA AGCGTCGAAT TTCGCAGCGG GTCAATTGCT GCGCGATGCG
CTTCAGCTAA AGCTCCGCAC GGGTGCAGGC CCATTTCGCA GTTTCGGCAA CATCGCGGTT
GAACCCCGCG CCTACCAACT CGTGCCGCTG CTGATGGCTC TTAAGCAAGA CGTGGTTCGG
CTGTTGGTTG CCGATGACGT TGGTATCGGG AAAACCATTG AGGCCGCGCT CATCGTCCGC
GAGCTCCTTG ACCGTGGTGA AATTTCCCGC CTCGCCGTGC TATGCCCGCC GCATCTGTGT
GAGCAGTGGC AGCGCGAATT GAAGGAGCGC TTCCACATCA ATGCAGTCGT AGTTCGAAAT
ACCACCGCCA GCCGACTGGA ACGCGGCCTC CCGGCGAACC AGTCCGTCTT CGAGGCCTAT
CCCTTTACGG TGGTCAGCCT GGACTACATC AAGTCCGACC GCCGTCGTGA TGAGTTCCAG
CGGGCGTGTC CAGAGTGCGT CATCGTCGAT GAGGCGCACA CCTGCACTTT CAGCGGTCAA
GGCCGTCAAC AGCGCTATAC GCTATTGAAA GGGCTTGCCG AAAATCCTGA ACGGCACATG
GTCTTGCTCA CCGCGACGCC GCACTCCGGT GACGAAGACG CGTTCTACAA CTTGCTTGGC
CTCTTAAAGC CAGAGTTTTG TGAACTGAAG GACCTCCCGC CCGATAGTCG CAAGCCGTTG
CGCGAACAGC TTGCGAACCA CTTCGTCCAG CGTCGTCGAC CGGATATTGA AGAGTGGCAG
GACCGGCAGG TGTTTCCCGA ACGTCTGACC ACCGAAATCA CCTACAAGCT GACCGGTGAG
TGGGGCAACC TGTTTGATGA CGTGCTCGCC TACGCTCGCG AACTCGTTAT GCGCACTGAA
GACCAGGGCC TGGTGCAGCA GCGCATGAGC TGGTGGGCAG CGTTGGCACT GTTGCGCTGC
ATCTCGTCGT CTCCACAGGC CGCCGTGAAT GCGCTGCGAA CTCGTCTTCG GGGGCAAACG
CCGGCAGGGC TGGATGAGGC TGCGGAAGCC GTCACGCTTG AAGAAGCAGA TGAGCAGGGC
AGGGAGCGTG TGCTGGACGG CACCGAGGAC GACCTGACGA CCCAGGATAT AGAGCCGGCG
GCCAACACGG AAGATAGCGC GCTCCTGTTG GCGCTCGTTG CACGTGCTGA AAGCTTGGCG
GGCACGGGAA AAGACCCCAA ACTCAAGCGC CTCATCGACC ATCTTAAGGA GCTCACAAGC
GACCGCTTCC AGCCGGTTGT GTTCTGCCGC TATATCGCCA CCGCTCACTA CGTCGCCGAA
CAATTGCGCC TCGTTTTTCC AGACCACCAG GTCACTGCTG TCACCGGCGA GTTTGCACCG
ACCGAACGGG AAGCTGCCGT CGATGCGATG GGGGAGGCGG AGCAGCGCAT TCTGGTTGCG
ACCGACTGTC TCTCGGAGGG TATCAACCTC CAGAACCTTT TCACGGCGGT GGTCCACTAT
GACCTTTCGT GGAATCCTAC TCGGCACGAA CAGCGCGAGG GTCGCGTCGA CCGCTTTGGG
CAAAAGGCCC GTGAGGTACG AACTACCTTG CTCTACGGTC AGGATAATCC GGTCGACGGC
GCAGTGTTGC AGGTCATCTT GCGTAAAGCG GAAAGCATTC GCAAGGAACT CGGCGTGCTT
GTGCCGATGC CGGACGACCA AGGAAAGCTG ACGCAGGCGC TAGTCGGCGC CGTTTTGTTG
AGGAAAGGCA CCTCCACCGC GAAGATGCCA CAACTCGGTC TGGACTTTGG CGCTCCCGAG
GAAGCCATTG ATACAGCGTG GCAGTCGGCG CGGGACAGGG CCGCAAGAAA TCGAACCCTC
TTTGCTCAGC GCCGCCTCAA GCCGGAGGAT GTGCTGCCTG AATGGCAAAA GACAATGGCT
GTGCTGGGTG GGGAAGCGGA CGTTGAGCGC TTCGTGAAAC GAGCATCTGT CCAACTCGGG
GCTCCATTGG AGCCCAGCAC CAAAGGTGGT GCCAACCACT GGAAGCTCCA CGCGGGAAGC
CTGCCAATGG CGGTGCGTGA GCGCCTGGAG GGGGAGGGGC TTGTGGGTAC GCTACATATC
GATTTTCACC AGCCTCCTGC TCCGACCGCA CAGTTCATTC ACCGTACCCA TCCACTTGTG
TCTGTATTGG CTGACTACCT GCTTGAAGTC GCCTTGGATG AGGGGCGGGA GATGGACGGA
GTCGGCGCGG ATGCAGTGGC GCGTGCTGGG GCCATTTTCA CCGATGCCGT TGCAATTCGC
ACCACAGTGC TGTTGGTTCG CCTGCGCCAC CAACTGACGG TGACGCTTCG TGGCAACTCG
CGTCTGCTGC TCTGCGAAGA AACGCTGGCT GTGGGCGTGG CCGCCGGCGA GGAGTCCGAG
CCGCTTGGTG ACGGCGCTGC GCGCGCCCTG ATGGCAGCAG AGCCAAGCCG AAACATGCCG
CCACCACTGC GCGACCAGCA TATCCAGCGG GCGCTCGACC AGCTACCCAA CTGGCAGCCA
GTACTGGAGG ACTTAGCTCG CACACGCGCT CAGCTGCTGC TCGAAGACCA TCGTCGCGTT
CGCGTGGCTT CAGACGCACG AGGGGAATAC CGGGTCGCGC CCAGCCTTCC CGTCGATGTC
ATGGGGGTCT TTGTCCTCAT CCCGGCCTGA
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| Protein sequence | MSGQASFQPG SLVSARGREW IVLPQSSTDT LYLRPLGAAE DDATLIYLPI ELHPVGPATF
PWPRIEQASN FAAGQLLRDA LQLKLRTGAG PFRSFGNIAV EPRAYQLVPL LMALKQDVVR
LLVADDVGIG KTIEAALIVR ELLDRGEISR LAVLCPPHLC EQWQRELKER FHINAVVVRN
TTASRLERGL PANQSVFEAY PFTVVSLDYI KSDRRRDEFQ RACPECVIVD EAHTCTFSGQ
GRQQRYTLLK GLAENPERHM VLLTATPHSG DEDAFYNLLG LLKPEFCELK DLPPDSRKPL
REQLANHFVQ RRRPDIEEWQ DRQVFPERLT TEITYKLTGE WGNLFDDVLA YARELVMRTE
DQGLVQQRMS WWAALALLRC ISSSPQAAVN ALRTRLRGQT PAGLDEAAEA VTLEEADEQG
RERVLDGTED DLTTQDIEPA ANTEDSALLL ALVARAESLA GTGKDPKLKR LIDHLKELTS
DRFQPVVFCR YIATAHYVAE QLRLVFPDHQ VTAVTGEFAP TEREAAVDAM GEAEQRILVA
TDCLSEGINL QNLFTAVVHY DLSWNPTRHE QREGRVDRFG QKAREVRTTL LYGQDNPVDG
AVLQVILRKA ESIRKELGVL VPMPDDQGKL TQALVGAVLL RKGTSTAKMP QLGLDFGAPE
EAIDTAWQSA RDRAARNRTL FAQRRLKPED VLPEWQKTMA VLGGEADVER FVKRASVQLG
APLEPSTKGG ANHWKLHAGS LPMAVRERLE GEGLVGTLHI DFHQPPAPTA QFIHRTHPLV
SVLADYLLEV ALDEGREMDG VGADAVARAG AIFTDAVAIR TTVLLVRLRH QLTVTLRGNS
RLLLCEETLA VGVAAGEESE PLGDGAARAL MAAEPSRNMP PPLRDQHIQR ALDQLPNWQP
VLEDLARTRA QLLLEDHRRV RVASDARGEY RVAPSLPVDV MGVFVLIPA
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