| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2641 |
|---|
| Symbol | |
|---|
| ID | 8020305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2784655 |
|---|
| End bp | 2785251 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831421 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_002982584 |
|---|
| Protein GI | 241664224 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC GGTTGCATAT CGGAGCCGAC GGATGGGTCG ATGGCGGACG TCGGCATCCG
TCGCCGAATA TCGACGCGCG GCCCGAGGGC ATGCCGATCG ACCTGATCGT GCTGCACAAC
ATCAGCCTGC CGCCTGCGCA ATCCGCGGTG GACTTCGGCA CCGATCACGT GCTGGACTTG
TTTACCAACA CGCTCGACTG CGACGCGCAT CCGTACTTCG ATCAGCTGCG CGGCGTGCGC
GTGTCGGCCC ACTTCTTCAT CCGCCGCACG GGCGAATGCG TGCAATTTGC GTCGTGCGAC
GCGCGCGCCT GGCATGCCGG TGCGTCGGAC TTTTTCGGCC GCACGCGCTG CAACGATTTC
TCCATCGGCA TCGAAATCGA GGGCACGGAC GATCTGCCCT TTACGCCCGA GCAGTACGCC
ACCACGGCAT CGCTTGTGCG GGCGATCTGC GCGGCGTATC CGATTGCAGC GATCGCCGGT
CATTCGGACA TTGCCCCGGG CCGCAAAACG GACCCCGGAC CGCATTTCGA CTGGGCGCAT
CTGCGTGCGC TGGGCGGATT CAATGCGGCG TTGTTCCCGT ATCAGCACGC GCTCTGA
|
|---|
| Protein sequence | MPERLHIGAD GWVDGGRRHP SPNIDARPEG MPIDLIVLHN ISLPPAQSAV DFGTDHVLDL
FTNTLDCDAH PYFDQLRGVR VSAHFFIRRT GECVQFASCD ARAWHAGASD FFGRTRCNDF
SIGIEIEGTD DLPFTPEQYA TTASLVRAIC AAYPIAAIAG HSDIAPGRKT DPGPHFDWAH
LRALGGFNAA LFPYQHAL
|
|---|
| |