Gene Rpic12D_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2632 
Symbol 
ID8020296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2769902 
End bp2771449 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content65% 
IMG OID644831412 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_002982575 
Protein GI241664215 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.397554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.945455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGT GGACACTCAA AGCAAAGCTG CGCCTCGCGC TGGCCCTGAT GTGGCTGGGG 
CTGATCGGCG TCGGGATCTG GAGCGCGATG GAGACCCGCG CGACCATGCT CGACGAACGC
AAGGCCGGCC TGCAGAACCT CGTAGATGCC GCCGAGGGCA TCGCCAAGCT GTATCACGGC
CGCGCGCAAT CGGGCGCCAT GACCGAAGCT GATGCCAAGA AAGCCGCGCT GTCGACGCTC
GCCTCGATGC GCTTCGGCAC CACGGGCTAT CTGTTCGTGG TCGATTCGCA GTTCATCCTG
CTGATGCACC CGACGCTGGC GGACATGGTC GGCAAGAGCA CCGCGGGCTT CAAGGACCCG
ACCGGCAAAC CGGTCTATCC GACCATCGTC AACGCCGCCA AAGACAAGGG CTTCGGCTTT
GCCGAATACC AGGGTCGCCT GCCCGGCAGC GAGACCGCAT TGCCGAAGAT CGGCTACGTG
AAGCACTTTG CGCCATGGGA CTGGAATCTC TCCAGCGCCG TCTTTCTGCA GGAAGTAGAT
GCGGCGTATC GCCATTCGCT CGTCGCGAAC CTGATCGTCA TTCTGCTGGT GGGCGGCGCG
GTGTCGCTGG CCATGTCGCT CATCATCCGC AACGTGCAGC GCGGACTGGG CGGCGAGCCG
GGCTACGCCA CGGAGGTCGC ACGGCGCATT GCCGGCGGTG ATCTGGCCGT GCAGGTCCAA
ACCCGCTCCG GCGACCGCGA CAGCATGCTG GTCGCCATGG CGCAGATGCA GCAGCAACTG
ACCGGCACCA TCGGCCATAT CAAGACATCG GCGGACTCGA TCGCGAGTGC CACCAAGCAG
ATCGCCGCCG GCAACGCCGA CCTGTCGCAA CGCACGGAAG AGCAGGCTTC GTCGCTGGAA
GAAACCGCGT CGAGCATGGA AGAGCTGACG AGCATCGTGC GTCAGAACGC CGACAACGCG
CGCCAGGCCA GCACGCTGGC CGTCAACGCG TCGGACATCG CAGCCAAGGG CGGCGAGGTG
GTCGGCCGCG TGATCGACAC CATGGCCGGC ATCAACGAAA GCAGCAAGAA GATCGCGGAC
ATCATCGGCG TGATTGAAGG CATCGCCTTT CAGACGAACA TCCTGGCGCT GAACGCGGCG
GTCGAGGCCG CGCGCGCCGG CGAACAGGGC CGCGGCTTTG CCGTTGTTGC CGGCGAGGTG
CGCAACCTGG CGCAGCGCTC GGCCGGGGCG GCCAAGGAGA TCAAGGAACT CATCGGCGAT
TCGGTCGGCC GCGTGGAAAA CGGCACCACG TTGGTGGCCG AAGCGGGCAA CGTGATTGAC
GAGGTGGTGG TCGCGGTCAA ACGCGTGACG GACATCATGG GCGAGATCAG CTCGGCCTCC
GAAGAACAAA GCGCCGGCAT CGAGCAGGTC AACCAGGCCG TGAACCAGAT GGACGAGGTG
ACGCAGCAGA ACGCCGCACT GGTCGAGCAA GCGGCCGCCG CTGCGCTGTC GCTGGAAGAA
CAGGCGCAGG TGCTGCGCGA CGCGGTAGCG TCGTTCCGTA CCGCCTGA
 
Protein sequence
MRQWTLKAKL RLALALMWLG LIGVGIWSAM ETRATMLDER KAGLQNLVDA AEGIAKLYHG 
RAQSGAMTEA DAKKAALSTL ASMRFGTTGY LFVVDSQFIL LMHPTLADMV GKSTAGFKDP
TGKPVYPTIV NAAKDKGFGF AEYQGRLPGS ETALPKIGYV KHFAPWDWNL SSAVFLQEVD
AAYRHSLVAN LIVILLVGGA VSLAMSLIIR NVQRGLGGEP GYATEVARRI AGGDLAVQVQ
TRSGDRDSML VAMAQMQQQL TGTIGHIKTS ADSIASATKQ IAAGNADLSQ RTEEQASSLE
ETASSMEELT SIVRQNADNA RQASTLAVNA SDIAAKGGEV VGRVIDTMAG INESSKKIAD
IIGVIEGIAF QTNILALNAA VEAARAGEQG RGFAVVAGEV RNLAQRSAGA AKEIKELIGD
SVGRVENGTT LVAEAGNVID EVVVAVKRVT DIMGEISSAS EEQSAGIEQV NQAVNQMDEV
TQQNAALVEQ AAAAALSLEE QAQVLRDAVA SFRTA