| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2627 |
|---|
| Symbol | |
|---|
| ID | 8020291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2764039 |
|---|
| End bp | 2764506 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831407 |
|---|
| Product | 17 kDa surface antigen |
|---|
| Protein accession | YP_002982570 |
|---|
| Protein GI | 241664210 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3133] Outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.940371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCA TCTATCGCAT CGGCGCCGCG ACTCTGCTGG TCGCCGCCCT TGGCCTGCAA
GGCTGCGCCA TGGGCACCAA TTCCAACAGC GCTTACACCT CGGGTCAGGC GCAGCGCGAG
CAGACCGTGC GCTTCGGTAC GGTGGATTCC GTGCGCAATG TCGTGATCGA CCGTGAACAG
ACGGGCGTTG GCACCATTGC CGGGGGCGCG ATCGGCGGCA TCGGTTCGGC TGCCGCCATC
GGCCGCGGCA ACGGCTCGGT CGCAGCGGGT GTGCTCGGTG CGATTCTCGG CGGCGTGGCC
GGCAGCGCGC TCGAAGGTCA GATGAATAAG CGGCCGGGCC TGGAAATCAC CGTCAAGCTC
GACAACGGCG AGTACCGTGC GATCACGCAA GACGCGGACG AGGCGTTCCG CCCTGGTGAG
CGCGTGCGCC TGCTCTCATC GGGTGGCGTG ACGCGCGTCA CGCACTGA
|
|---|
| Protein sequence | MKPIYRIGAA TLLVAALGLQ GCAMGTNSNS AYTSGQAQRE QTVRFGTVDS VRNVVIDREQ
TGVGTIAGGA IGGIGSAAAI GRGNGSVAAG VLGAILGGVA GSALEGQMNK RPGLEITVKL
DNGEYRAITQ DADEAFRPGE RVRLLSSGGV TRVTH
|
|---|
| |