Gene Rpic12D_2599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2599 
SymbolaraG 
ID8020263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2737205 
End bp2738734 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content65% 
IMG OID644831379 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_002982542 
Protein GI241664182 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCC AATCACTTGA TGCGAGCGGT CCGCCCGACG CTTCCGCTGC CGCCTATCTG 
AAGCTCGACG GCATCACCGT GCGCTTTCCT GGCGTGCTGG CGCTCGACCA TGTATCGCTC
GACATCCGCC GCGGCGAGGT TCACGGCCTG ATGGGCGAGA ACGGCGCAGG CAAGTCGACG
CTGCTCAAGG TGTTGTCGGG CGTCAACCAG CCGGAGGCCG GCACGCTGTC GCTGGACGGC
TTGCCGCAGC AGTTCACGAA CACGCGCGCG GCCATTGCGG CGGGCATCGC GATCATCTAT
CAGGAACTGC ACCTCGTGCC GGAACTGACG GTGGCAGAAA ACCTGATGCT CGGCGCGCTG
CCCAACCGCT TTGGTGTGCT CGACGAGAAG ACGCTGATCG CCCGCGCGCT GCGTGAACTC
GAACGGCTGG GCGAAAGGCT CGATCCGGCC CAGCCCGTCA AGCATCTGTC GATCGGCCAG
CGCCAGATGA TCGAGATCGG CAAGGCGCTG ATGCGCGACG CGCGCGTGAT CGCGTTCGAC
GAACCCACGA GTTCGCTCTC CTCGCGCGAG ACGACGCAGT TGTTCCGCAT CATTCGCGCA
CTCAAGGCCG AGGGCCGCGC GGTCATCTAC GTCACGCACC GCATGGAAGA GGTGTACGAG
CTGTGCGACC GCGTAACCGT ATTCCGCGAC GGCCGGCACA TCGACACGTT CAACGCCGGC
GCCAACCTCG ACCGCGAACG GCTGATCCGC TGCATGGTCG GCCGCTCGAT CCAGGACGTG
TACGGCTACA AGCCGCGCCC GCTCGGCAGC GTGAAGGTCG ACGTGCGCGG CCTGATGGGA
CCCGGCTTGA GCGAACCCGC ATCGTTCCGC GCGCATGCAG GCGAAATCGT CGGCTTCTTC
GGGCTGGTGG GCGCGGGGCG CTCGGAGCTG ATGAAGCTGC TCTATGGCGC GATCAAACCC
ACAGCAGGCG AGATTCGCCT CAACGGCAAG CGCGTCCAGT TCAACACGCC GCGCGATGCG
GTGCGCGCGG GTGTCGCGCT CTGCCCGGAA GACCGCAAGC AGGAAGGCAT CGTCGCCATC
GCCTCGGTCT CGGATAACCT GAATATCAGT TGCCGGCGCC ACTTCAGCCG CTTCAGCGTG
TTGAACAACC GGCAGGAAAC GCAGACCACC CAGTCTTTCA TCGACAAGCT TGCCATCAAG
ACACGCAATG GTGAAACGCC GATCGGCAAG CTCTCGGGCG GCAATCAGCA GAAGGTGATC
CTCTCGCGCT GGCTGGCGGA TGACATCGAC GTCTTCCTGA TGGACGAACC CACGCGCGGC
ATCGACGTCG GCGCCCGCAG CGAAATCTAC AGCCTGCTTT ATGGGCTCGC CCAGGCCGGT
CGCACTGTCA TCGTGGTGTC GAGCGATCTG GCGGAAGTCA TCGGCATTTC CGACCGCGTG
CTCGTCATGA AGCAGGGCCG CATCGTCGGC GACCTGCCCA GAGAGCACGC CTCGCCCGAC
ACCCTCATCA AACTCGCGCT GCCACGCTAG
 
Protein sequence
MTVQSLDASG PPDASAAAYL KLDGITVRFP GVLALDHVSL DIRRGEVHGL MGENGAGKST 
LLKVLSGVNQ PEAGTLSLDG LPQQFTNTRA AIAAGIAIIY QELHLVPELT VAENLMLGAL
PNRFGVLDEK TLIARALREL ERLGERLDPA QPVKHLSIGQ RQMIEIGKAL MRDARVIAFD
EPTSSLSSRE TTQLFRIIRA LKAEGRAVIY VTHRMEEVYE LCDRVTVFRD GRHIDTFNAG
ANLDRERLIR CMVGRSIQDV YGYKPRPLGS VKVDVRGLMG PGLSEPASFR AHAGEIVGFF
GLVGAGRSEL MKLLYGAIKP TAGEIRLNGK RVQFNTPRDA VRAGVALCPE DRKQEGIVAI
ASVSDNLNIS CRRHFSRFSV LNNRQETQTT QSFIDKLAIK TRNGETPIGK LSGGNQQKVI
LSRWLADDID VFLMDEPTRG IDVGARSEIY SLLYGLAQAG RTVIVVSSDL AEVIGISDRV
LVMKQGRIVG DLPREHASPD TLIKLALPR