Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2585 |
Symbol | araH |
ID | 8020249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2722117 |
End bp | 2723124 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831365 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_002982528 |
Protein GI | 241664168 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGT CTCAACCCCT GCAACATTCC GATGCGCTCG CCGCATCGGC AGGCTCTGCC ATGAACAAGA CGCGCCTGCT TCGCCTGCTG GACGATTTCA GCCTGCCGCT GATCTTCGCC ATCCTCTTTG CCGCGCTGTC GTTCTCGGTC GAGTATTTCT TCTCGTGGCA GAACATGGTC GGCCTTGCGC TGTCGGTCTC GCAGATCGGC ATGGTCGCCT GCACGATGAT GTTCTGTCTG GCGTCGCGTG ATTTCGATTT GTCGATCGGC TCCACGGTGG CGTTTGCCGG CGTGCTCTGC GCGATGATCA TCAACGCCAC CGGCAGCATT GCACTCGGCA TTGGCGCCAG CCTGGTGGCA GGCGCGATCA TCGGCGGCAT CAATGGCTTC GTGATCGCCA AGCTGAAGAT CAATGCGCTG ATCACCACGC TGGCCACAAT GGAAATCGTG CGCGGCCTCG CCTTCATCGC CTCGCATGGG CAGGCGGTGG GCGTGTCCGA CATGGATTTC TTCGACCTCG GCAACACCAT CTTTTTTGGT GTGCCGACGC CGGTGTGGGT CGCGGCGCTG TGCTTCGTGG TGTTTGGTGT GCTGCTCAAC AAGACGATCT ACGGCCGGAA TACGCTGGCG ATCGGCGGCA ACCCGGAGGC GGCGCGGCTG GCCGGCGTGA ACGTCAACAT GACGCGCATC GTCATCTTCC TGATCCAAGG CGTGATTGCC GCGCTGGCCG GCGTGATTCT GGCGGCGCGC ATCACCAGCG GCCAGCCGAA TGCGGCGCAA GGCTTTGAGT TGAACGTGAT CTCGGCCTGT GTGCTGGGCG GCGTGTCGCT GCTCGGCGGC CGCGCGACCA TCAGCGGGGT CCTGGTCGGC GTCTTGATCA TGGGCACCGT GCAGAACGCG ATGAACCTGC TGAATATCGA CGCGTTCTAT CAGTACCTGG TGCGCGGCGC GATTCTGCTG GCGGCGGTGC TGGTGGACCA GTTGAAGAAC CGCGGCGGTC GCGAGTGA
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Protein sequence | MSQSQPLQHS DALAASAGSA MNKTRLLRLL DDFSLPLIFA ILFAALSFSV EYFFSWQNMV GLALSVSQIG MVACTMMFCL ASRDFDLSIG STVAFAGVLC AMIINATGSI ALGIGASLVA GAIIGGINGF VIAKLKINAL ITTLATMEIV RGLAFIASHG QAVGVSDMDF FDLGNTIFFG VPTPVWVAAL CFVVFGVLLN KTIYGRNTLA IGGNPEAARL AGVNVNMTRI VIFLIQGVIA ALAGVILAAR ITSGQPNAAQ GFELNVISAC VLGGVSLLGG RATISGVLVG VLIMGTVQNA MNLLNIDAFY QYLVRGAILL AAVLVDQLKN RGGRE
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