| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2544 |
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| Symbol | |
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| ID | 8020208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2675643 |
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| End bp | 2676773 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831324 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_002982487 |
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| Protein GI | 241664127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.374361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.108185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCATC CGAAAGTTGT AACGGCGCCT CACACCGGCG ACATTTCGGT CTATGTCGTT
CGGTTGACCG GGCTAGAATC GCTCGACCCG CTGGCACAGC TGTACCCTCC CATGTCGATC
GATCACCCGC CTTTGCAAAA CCCAGCCACG CTGCTCGAAA TCGTGCGAGC ACAGTCCCAG
ATCGCCAAGC TCGGCACCGA TCTGGGCGCC ATCATGGCGT TGGTCGCCGA GCGGGCACAG
CATCTGACGT GCGCGACGGG CGCGGTGGTC GAAATGGCGG AAGGCGATGA GATGGTCTAT
CGCGCCACGT CGGGCCTGAC CGAAACGCTG CTGGGCCTGC GACTTGCGCG CCAGGGCAGC
CTGTCGGGCC TGTGCGTACA GACCGGCGAA ATCCTGCACT GCACCGATTC CGAAACCGAC
CCGCGCGTCG ACCGTGAGGC CTGCCGCCGC GTAGGTCTGC GCTCGATGGT GGTCACACCA
CTGCGCCACC TCGACACCAC GGTCGGCGTG CTCAAGCTGG TAGCGCCGGA GGTCGACGCC
TTCAGCGCCA GCGACATCGG CGTGCTGGAG TTGATGTCCG AGCTGATTGC CTCGGCCATG
TTCCACGCCG CCAACGCCGA GCGCGATCAG CTGTACCTGC GCGCCACGCA CGATGCGCTG
ACGGACCTGC CCAACCGCGC GCTGTTCTAT GACCGCCTGC GGCAGTCGAT CCATCTGGCG
CAACGCGCGC ACGGTGGCTT GGGCGTGCTC AACATCGACA TGGACAACCT CAAGCTCATC
AACGATCGGC ATGGGCATCG CGCGGGCGAT GCGGCGATCC GCGAGACCGC ACAGCGCATG
GGCCGCACGG CACGACGCTC CGACACGGTG GCGCGCGTGG GCGGCGACGA GTTTGCCGTG
CTCCTGCCTG GCATTGGCGC GCGGGCCGAT GCACAGGCGC AAAGCGAGCG GATCATTGAA
GAGGTGCAGC AGCCGTACGT GTTCGAGGGC CAGCCGCTGG ACCTTCGCGT GAGCGTCGGC
ATCGCGGTCA TGCCCGAAGA CGGCACGGAG ATCACCACCC TGCTCGATCA GGCCGATCGC
GAGATGTACA CCGTCAAGCG CTTGCGCAAG CAGGTACAGC CCGCGCATTG A
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| Protein sequence | MVHPKVVTAP HTGDISVYVV RLTGLESLDP LAQLYPPMSI DHPPLQNPAT LLEIVRAQSQ
IAKLGTDLGA IMALVAERAQ HLTCATGAVV EMAEGDEMVY RATSGLTETL LGLRLARQGS
LSGLCVQTGE ILHCTDSETD PRVDREACRR VGLRSMVVTP LRHLDTTVGV LKLVAPEVDA
FSASDIGVLE LMSELIASAM FHAANAERDQ LYLRATHDAL TDLPNRALFY DRLRQSIHLA
QRAHGGLGVL NIDMDNLKLI NDRHGHRAGD AAIRETAQRM GRTARRSDTV ARVGGDEFAV
LLPGIGARAD AQAQSERIIE EVQQPYVFEG QPLDLRVSVG IAVMPEDGTE ITTLLDQADR
EMYTVKRLRK QVQPAH
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