Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2527 |
Symbol | |
ID | 8020191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2653863 |
End bp | 2655470 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644831308 |
Product | histidine kinase |
Protein accession | YP_002982471 |
Protein GI | 241664111 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0731082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCGC CAAAACCGGT CTCCGACGCG CCAGACGGGC GGCGCTTTGG AATCGCTTCT CCGTCGATCT TGCGCCCTAT CCGGGTGCGG CTGACGCTGG TGTTCGTGGT TTTTTTACTG TTGGTGGTTG GCGTCGGCGC TTTCAGTATC GACCAATTGG CGAGTTTCCA CAGCGTATCT GCGCAGATCA GCGGGCGCTG GCTTCAGAAC AGCCGAATTC TAGGGGACCT GAACAACTAC ATCTCGGATT ACCGCGCGGC CGAAGGCGAT TTTCTGATCG CCTCGTCACG CGCCGATCTG CGAGCTGCCG ACGAACAGGT CGCCATGCTA GACAAGTTGA TTGCCACGTC CCAAGCCCGC TACGACAAGA TCGAGCACGA TAGTGCCGAA CACGAGCTCT ACAGCCAGTT TGTCACCCAA TGGAATACGT ATCGTGAGCT CGCGAAACGG CTGATGATTA CTGCCAAGGC AGGCGACGTA GGGGGCGGTA CGCGGCTCTA CCACACGGAC TCCAAGCATG CATTCGACTT GGCCAACGAC ACACTGGGCG TGATGACCGA GCGCAGTGTC GCTGGCGCGG CAGCAGAAAC CGAGCGTGAG GCACAGGCCT ACCACGACGC GCGGCAACTC ATCATTGGGG CGATCGTAGT GGCGGCATGG CTGGTCGTGC TGGCTGTGAT CTACCTTGTC TACGCTGTGT CGCGGCCGAT TGCTGCGTTG GTCGATCGCA TGCACCACAT TGCCAACAAC GACACCCGGA TCGACATCCC TGGCTTGGAG CGCCACGACG AGATCGGCGA TATTGCGCAG GCCGTGGCGC GCTTTCGAGA AAACACAATC GAATTGGGAC GCAGCAAGGA TGCACTGATT GCCCAAGCCG CCGTATTGCA GGAGACGCTC GACAAGGAGC GTCGCATGGC TGAGCTGCAG CGCAATTTCG TCTCGATGGC TTCGCATGAA TTCCGCACAC CACTAGGCGT GATTGATGGT CAGGCCCAGC GGTTGATGCG CATGCGTGAC GCTTTGCCGC CTGAGGCGCT GGAAGAGCGC TGCGGGAAAA TTCGCGCGGC GGTGCAGCGC ATGACGCACC TCATGGATCA CCTGCTCGAC TCTTCGCACT GGTTAGATTC CACGACGCCC GCAGCGATGC GGCGCACCGA TTTGCCGCTT GCGGCACTTT TGCACGAGGT TTGCGAGATG CACCGGGAAA GTACGCCAAG CGCACGGATC GACGAGTGCG TAGAGACTGA TGAGCCGAAC ACATTCTTCG GCGATGCCCG GCTTCTGTTC CAGGCCTTCA GCAATCTTGT CGGCAACGCC GTCAAGTACT CACCGCCAGG CACACCGGTC AGCGTGCGTA TGCGCAGCGA TGCCGACGGT GTGTCGGTGA CGGTTGAAGA CCGGGGCATG GGCATACCCG AACGCGATAT CGAGCGTTTG TTCGAGCGCT ACGTGCGTGG GGGCAACGTT GCGGGGACGG TCGGGGCAGG TGTAGGGCTT TATTTGGTGA AGCTGGTAGT GGAACTGCAC AGAGGGACGA TCACCGTGAC CAGCGAAGAA GGCAAAGGCT CAACATTCAA CGTGTTCTTA CCCCGCCTGA AAAGCTAG
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Protein sequence | MHSPKPVSDA PDGRRFGIAS PSILRPIRVR LTLVFVVFLL LVVGVGAFSI DQLASFHSVS AQISGRWLQN SRILGDLNNY ISDYRAAEGD FLIASSRADL RAADEQVAML DKLIATSQAR YDKIEHDSAE HELYSQFVTQ WNTYRELAKR LMITAKAGDV GGGTRLYHTD SKHAFDLAND TLGVMTERSV AGAAAETERE AQAYHDARQL IIGAIVVAAW LVVLAVIYLV YAVSRPIAAL VDRMHHIANN DTRIDIPGLE RHDEIGDIAQ AVARFRENTI ELGRSKDALI AQAAVLQETL DKERRMAELQ RNFVSMASHE FRTPLGVIDG QAQRLMRMRD ALPPEALEER CGKIRAAVQR MTHLMDHLLD SSHWLDSTTP AAMRRTDLPL AALLHEVCEM HRESTPSARI DECVETDEPN TFFGDARLLF QAFSNLVGNA VKYSPPGTPV SVRMRSDADG VSVTVEDRGM GIPERDIERL FERYVRGGNV AGTVGAGVGL YLVKLVVELH RGTITVTSEE GKGSTFNVFL PRLKS
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