| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2521 |
|---|
| Symbol | |
|---|
| ID | 8020185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2646403 |
|---|
| End bp | 2648001 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644831302 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002982465 |
|---|
| Protein GI | 241664105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.156556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGGC GGCGGCATCC ATCCGTGTTG GTCTCGCTAT CCAAAGCCAA CGCCCAAGAT
GGGGCCGGTC GCTTATCGCT CCTATCGCTC CACCAAACTG AAAGGCAAGC AACCCGATGC
TGGGTTTCAG TCGGAACCAC AATGCTCTTG CGCATCGGTG ACCTGTGGCG CGAGCAGGGC
TTGGAATCCC GCGCGGCTGA CGAAGAGTTG CTTTGTGAAG ATCTGGCGAT CAGCCGAGAC
ACCTGCGAGC TCTTAAAAGC CGGATCGAGC TTCGACGACG GCAGTTTCAT GCTGCCGCTC
CAAGAGCATG CGGGACATCG CGAAAACACG CACTCCTATT GCGTCCGGGT CACGCTACCT
GACGGAAAGC TCCTTGTCGT ACCGTGCATG GAGTTGATCC GCTTCTATTT TGGGTCGTCC
AGCGAACTCC TCAACCGGCT GTTCGTGCCC CCACTCCAGA GAGAGAATCT CTACACAGGG
ATGACAATCG ATCGGCACAA CCGGATGACG ATCCAACTTG CCGACCGCAT TCCGCGTGCG
AGCGCGGAGG ACATCGCCCG AATCGCTGGA AGCCGACTCG CCTGGCGTGC GGCTGCGATG
ATCGGTACCT CCTGTGTAAG TGCCGCGCAG GCGCGCCAGG ACATCTACCC TCAGACCCTA
TTTCCATTCG AAGGAACGAC AACAGTGCGG GCCGCTGGGA AGTGGCTGTC ACGAGGCGAC
GATCCAAAAG GGACGTTCCT CGTCTACCAA CTCCTGAGTT GCTCGCACCC GTTTCCTTTC
AAGTCATTGC AATTCCGCGT GACGGGCGCA AAGAAAGCTC GCAGCAGCGG CATGGCGCCC
GACACCCCAC CACCGGAAGC CGCGCCAACG GCCCGGAAAG CCCAGGAACC TTCCAAGATC
AGCCTGGAGG AACACGACCC TTCATCGCAG CTTGCTCCAG CTACGATGCC CATGAGCGGC
AATCGACGAT TTGTCGACCT GGAGAACAAG TGGGTCTTCG CAGACAGAAC CATTGCCGGG
AAAACACCTC GTGCCAGCGC CTCGTCTGGT GAACCGATCA GCGAGCATGC GATCGGCGAA
CCCGGCTCCA CGAAGCGCAT CCGAGAAGCG CAGATCGTCG AGGGCGACAA CGAAGTCCCA
GACCCACCTG CATTCCTGGA GCACGCTGTC AAAGCGCTAT CCACACTGGA CAACGCTTCC
GTAAGAGTCC TGACAGCGAG CCGCGACGAC GGGTGGTCCG TTCCCGTGCC GCTGATCGCG
GATGAGGACG GAGTACTTGA CGAGCACCTC CTGGTTCCGC AGGACATGCA CCGCCTCAAG
CGCGTGGCCG CCTTCGCAGT TTCCTCAAAG GAGGCGTCCA CGTTGCTCAT GGTCCACGAA
GCGAGTCCAC CCATATCGTT TGCTGTCCCG TTGAAAGACA AGAGTGACGA AGCGATACAG
CGCGCGATCC AGGCAGCGAC GGGGGCATTC ATCTCCGTCC AGAACGGCAC CGCCTATCAC
GTAGTGGCTT TGGAGCACAC ACTGGCAAAC GCTCCCGACG AACTGTGTTC CTGGATCTCA
ATGCAACTCC ACCACGCGGC CATCGCGTAC CTGCGCTGA
|
|---|
| Protein sequence | MLRRRHPSVL VSLSKANAQD GAGRLSLLSL HQTERQATRC WVSVGTTMLL RIGDLWREQG
LESRAADEEL LCEDLAISRD TCELLKAGSS FDDGSFMLPL QEHAGHRENT HSYCVRVTLP
DGKLLVVPCM ELIRFYFGSS SELLNRLFVP PLQRENLYTG MTIDRHNRMT IQLADRIPRA
SAEDIARIAG SRLAWRAAAM IGTSCVSAAQ ARQDIYPQTL FPFEGTTTVR AAGKWLSRGD
DPKGTFLVYQ LLSCSHPFPF KSLQFRVTGA KKARSSGMAP DTPPPEAAPT ARKAQEPSKI
SLEEHDPSSQ LAPATMPMSG NRRFVDLENK WVFADRTIAG KTPRASASSG EPISEHAIGE
PGSTKRIREA QIVEGDNEVP DPPAFLEHAV KALSTLDNAS VRVLTASRDD GWSVPVPLIA
DEDGVLDEHL LVPQDMHRLK RVAAFAVSSK EASTLLMVHE ASPPISFAVP LKDKSDEAIQ
RAIQAATGAF ISVQNGTAYH VVALEHTLAN APDELCSWIS MQLHHAAIAY LR
|
|---|
| |