| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2508 |
|---|
| Symbol | |
|---|
| ID | 8020172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2633001 |
|---|
| End bp | 2633825 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644831289 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_002982452 |
|---|
| Protein GI | 241664092 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA CTCTGAAACT CGGCTTCATC GGCGGCGGCA ACATGGCGGC GGCCCTCATC
GGCGGCCTGA TCGCCAAAGG CGCACACGGC GCCAACATCG TGGTGGTGGA CCCGACCGAA
CCCGCCCGCA GCCGCGCCGA GCAGACCTGG GGCGCCCGCA CAGCCGCCGC TCCGGGCGCC
GAACTGGCCG ACCGCGACGT GATCGTCCTG GCAGTCAAGC CGCAGCAGAT GCGCGAGGTC
TGTGCGCAAC TGGCACCGCA TCTGCGTGAC AGCCTGGTGC TGTCGGTGGC GGCGGGCATC
CGGATCCAGG ATCTGTCGCG CTGGCTGAAT GGCCACGCGC GTGTGGTTCG GGCGATGCCG
AATACGCCTG CGCTCTCCGG TCTGGGTATG ACCGGCCTGG CCGCCAATGC TGGCTTGTCC
GACGCCGACC GCGCGACCGC CAGCGCCATC GCCAATGCCG TCGGCAAGAG CGTTTGGGTG
CCCGCCGAAG CGCAGATTGA TGCGGTCACG GCCATCTCGG GCAGCGGCCC GGCGTACGTG
TTCTATTTCA TCGAGGCAAT GCAGCAGGCG GCGCAGGAGC TGGGGCTGTC GGCGGAGGAT
GGGCGCACGC TGGCGATCGA GACGTTTATT GGCGCGGCCA CGCTGGCGGG CCAATCATCC
GAGCCGGTGG AGGTGCTGCG CGAGCGTGTG ACTTCCAAGG GTGGGACGAC GTCTGCGGCG
CTGACTTCAA TGGAAGGGGC CGATATCAAG GCTGCTTTTG TGCGGGCGAT GCACGCTGCG
GCGGCTCGGG GGAAGGAGAT GGGGGAGGAG TTTGGACGGG ATTGA
|
|---|
| Protein sequence | MLDTLKLGFI GGGNMAAALI GGLIAKGAHG ANIVVVDPTE PARSRAEQTW GARTAAAPGA
ELADRDVIVL AVKPQQMREV CAQLAPHLRD SLVLSVAAGI RIQDLSRWLN GHARVVRAMP
NTPALSGLGM TGLAANAGLS DADRATASAI ANAVGKSVWV PAEAQIDAVT AISGSGPAYV
FYFIEAMQQA AQELGLSAED GRTLAIETFI GAATLAGQSS EPVEVLRERV TSKGGTTSAA
LTSMEGADIK AAFVRAMHAA AARGKEMGEE FGRD
|
|---|
| |