Gene Rpic12D_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2482 
Symbol 
ID8020146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2599438 
End bp2601144 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content69% 
IMG OID644831263 
ProductDNA repair protein RecN 
Protein accessionYP_002982426 
Protein GI241664066 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA GCCTCACCAT CCGCGATTTC GTCATCGTTC ACGCGCTGGA TCTTGATCTG 
GCCGACGGTT TCACCGTGTT CACGGGCGAG ACGGGCGCGG GCAAATCCAT CCTGATCGAC
GCGCTTGCAC TCACGCTGGG CGAGCGCGCC GATGCGGCCG TCGTACGCGA AGGCGCGCCG
CGCGCCGACA TCACCGCCGA GTTCGACGTG CATCCGCATG TAGCTGCATG GCTGGAAGCG
CATGAACTGC ATGACGACGA GGGCGTGATC CTGCTGCGCC GCACAGTCGA TGCCGCAGGC
CGCAGCAAAG CCTTCATCAA CGGCGCGGCC GTCACGCTCG CACAGCTGCG CGAAGTGGGC
GAGCAACTGG TCGACATTCA CGGCCAGCAT GCGCATCAAC TGCTGCTCAA GGCGGATGCG
CAGCGCAGCC TGCTCGATGC CCACGCAGGC CTGGAAGGCG CTGTGCGCGT GGTCGGCGAG
CGCTACCGCG AGTGGCACGC CGTGGTGCGC GCACGCGAAG CCGCCGAGCA GCAGTCGCGC
GAAGCCCAGC TCGAGCGCGA GCGCATCGAA TGGCAGGTCA ACGAATTGCA GAAACTTGGC
CCCCAACCCG GCGAGTGGGA AGAAGTCCAG GCCGAGCACC ATCGCCTGTC GCACGCCGCC
AGCCTGATCG AAGGCACGCG CGCGGCGCTC GATGGTTTGT CCGAATCGGA GGGTGCGGTG
CTCACGCAGC TGGGCACGAC GCTCCATACG CTGCGTGAAC TGGCCGAGAT CGATCCGGCG
CTTGCCGATG TGCTGGCCGC GCTGGAGCCG GCCGAGGTGC AGATTCAGGA AGCGGTGCAT
ACGCTCGCTC GCTATGCCGA TCGCGCGGAA CTGGATCCGG ACCGCCTGGC CGAAGTCGAC
GCGCGCATGC AGGCCCTGCA CACGATGGCG CGCAAATACC GCGTCGCGCC TGAAACGCTG
CCGGCTGAAC TGGCGGAGCG CCAGGCGCAA CTCGCTGCAC TGCAAGCCGC GTCCGATCTG
GATGCGCTGC AAGCCCAGGA AGCGCAAACG CACGCCGCAT ATATGTCGGT CGCGCAAGCG
GTGTCGCGCG ACCGCGCCAA GGCCGCGCGC GAGCTGGCGG ACGCGGTGAC CGGCGCCATG
CAAGGCCTCT CTATGGCCGG TGGGCGCTTT GACATCGCGC TGCACGCGCT GGAACACGGC
GGCGCGGCGG GGCTGGAGCA GGTCGAATTC CTCGTTGCCG GGCATGCGGG TGTTTCACCG
CGGCCGCTGG CGAAGGTCGC CTCGGGCGGC GAACTGGCGC GGATCAGCCT GGCCATCTCG
GTGATCGCCA GCGAGGCGAG CCCGACGCCC ACGCTCATCT TCGACGAAGT CGATTCCGGC
ATCGGCGGTG CAGTGGCCGA AGTCGTGGGA CGACGCCTGC GCGAACTCGG CATGCGCCGC
CAGGTGCTGT GCGTTACGCA CCTGCCGCAG GTGGCCGCGC TGGCCAACCA CCACATTCAG
GTCGCCAAGC AGACGGTGGC CGGCAGCACG CGATCCGACC TCGTGGTGCT GGACGCTACG
GGCCGCGTGG ACGAGATCGC CCGCATGCTG GGCGGGGCGT CCCTCACCGA CACGACGCGC
CGCCATGCGG ACGAAATGCT CGCCGCAGGC CGTGCACAAT CGGCACCAGA ACCCTCGGCG
CGGAAATCCC GCCGCGTGGC CCAGTGA
 
Protein sequence
MLRSLTIRDF VIVHALDLDL ADGFTVFTGE TGAGKSILID ALALTLGERA DAAVVREGAP 
RADITAEFDV HPHVAAWLEA HELHDDEGVI LLRRTVDAAG RSKAFINGAA VTLAQLREVG
EQLVDIHGQH AHQLLLKADA QRSLLDAHAG LEGAVRVVGE RYREWHAVVR AREAAEQQSR
EAQLERERIE WQVNELQKLG PQPGEWEEVQ AEHHRLSHAA SLIEGTRAAL DGLSESEGAV
LTQLGTTLHT LRELAEIDPA LADVLAALEP AEVQIQEAVH TLARYADRAE LDPDRLAEVD
ARMQALHTMA RKYRVAPETL PAELAERQAQ LAALQAASDL DALQAQEAQT HAAYMSVAQA
VSRDRAKAAR ELADAVTGAM QGLSMAGGRF DIALHALEHG GAAGLEQVEF LVAGHAGVSP
RPLAKVASGG ELARISLAIS VIASEASPTP TLIFDEVDSG IGGAVAEVVG RRLRELGMRR
QVLCVTHLPQ VAALANHHIQ VAKQTVAGST RSDLVVLDAT GRVDEIARML GGASLTDTTR
RHADEMLAAG RAQSAPEPSA RKSRRVAQ