Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2474 |
Symbol | |
ID | 8020138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2590165 |
End bp | 2591721 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831255 |
Product | histidine ammonia-lyase |
Protein accession | YP_002982418 |
Protein GI | 241664058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCA TGACCACGCC CCCCATCATC ACGTTGCAGC CGGGCGAAAT TTACTTTGCC GACCTGCGTC GCGTATGGCT CGCACCCACG CCTGTTGCGC TGTCGGGCGA TTGCGCGGCC GCCATCGAAG CCTCGGCAGC CACCGTGCAG GCCATCGTTG CCAAGGGCGA TCCGGCCTAC GGCATCAATA CCGGATTCGG CCTGCTGGCC AAGACGCAGA TCCCCACGCA CGAGCTGGAG CGCCTGCAAC GCAACCTGAT CCTCTCGCAC GCCGTCGGCA CGGGTGAAGA CCTCAGCGAC AACGTCGCGC GGCTGGTGCT GCTGATGAAG GCAGCGAGCT TGGCGCGCGG CTACTCCGGC GTGCGCCGTG TCGTGATCGA TACGCTGCTG GCACTGCTGA ACGCTGGCAT CGTGCCGTGC ATTCCGTCCA AGGGTTCGGT GGGCGCGTCG GGCGATCTGG CGCCGCTGGC GCACATGACG CTGGCCCTGC TGGGCGCGGG CGATGTGCGG GTGAACGGCG TACGCACGCC GGCACGTGCG GCATTGGCTG CCGCGGGCAT CGAACCGATT GCGCTGGCCG CCAAGGAAGG CCTGGCGCTC ATCAACGGCA CGCAGGTGTC GACCGCGCTG GCGCTCAACG GTCTGTTCCT GGCCGAGCGA CTGCTGCAAG CCGCTACGGT GTCGGGTGCG TTGTCGGTGG ATGCTGCCAA GGGCAGCGAT GCGCCGTTCG ACCCGCGCGT GCACACCGTG CGTGGCCAAG CCGGTCAGAT CGCCACCGCG GCCGTGTACC GCAACCTGCT GGCCGGCAGC GCCATCCGTC AGTCTCACCT CGTGGGCGAC AAGCGCGTGC AAGACCCGTA CAGCCTGCGC TGCCAGCCGC AAGTCATGGG CGCGTGCTTC GACCTGATCC GCCAGGCCGG CGCCACGCTG CTCACCGAAG CCAACGCCGT CACCGACAAC CCGCTGGTCT ACGCCGACGC CGGTGAGGTG ATCTCGGGCG GCAACTTCCA CGCCGAACCG GTGGCGTTTG CCGCCGACAT GCTCGCTCTG GCGATTGCCG AGATCGGTGC GCTGTCGGAG CGCCGCATCG CGCTGCTGAT CGACTCCACG CTGTCCGGCC TGCCGCCGTT CCTGGTCGAG CAACCGGGCC TGAACTCGGG CTTCATGATC GCGCACGTCA CGGCAGCGGC GCTGGCCTCG GAAAACAAGA CGTTCGCCCA CCCGGCCAGC GTCGACAGCC TGCCGACCTC CGCCAACCAG GAAGACCACG TCAGCATGGC GACCTTCGCC GGCCGCCGTT TGCAGGACAT GGCGGAGAAC ACCGCCACCA TCGTCGGCAT CGAAGCGCTG GCGGCAGCGC AGGGCATCGA CTTTCACAAG CCGCTGGCGA CGTCCGACAC GCTGCAGAAG GCACATGGCT GCATCCGCGC GCGCGTGGCG TACTACGGTG AAGATCGCCT GTTCGCTCCC GACATCGAAG CCGCCCGTCG CCTCGTACTC GATGGCGACC TGGGTGACTC GTGCCGCGCG CACGTGGGCG AACTCGCACT CGTCTGA
|
Protein sequence | MNTMTTPPII TLQPGEIYFA DLRRVWLAPT PVALSGDCAA AIEASAATVQ AIVAKGDPAY GINTGFGLLA KTQIPTHELE RLQRNLILSH AVGTGEDLSD NVARLVLLMK AASLARGYSG VRRVVIDTLL ALLNAGIVPC IPSKGSVGAS GDLAPLAHMT LALLGAGDVR VNGVRTPARA ALAAAGIEPI ALAAKEGLAL INGTQVSTAL ALNGLFLAER LLQAATVSGA LSVDAAKGSD APFDPRVHTV RGQAGQIATA AVYRNLLAGS AIRQSHLVGD KRVQDPYSLR CQPQVMGACF DLIRQAGATL LTEANAVTDN PLVYADAGEV ISGGNFHAEP VAFAADMLAL AIAEIGALSE RRIALLIDST LSGLPPFLVE QPGLNSGFMI AHVTAAALAS ENKTFAHPAS VDSLPTSANQ EDHVSMATFA GRRLQDMAEN TATIVGIEAL AAAQGIDFHK PLATSDTLQK AHGCIRARVA YYGEDRLFAP DIEAARRLVL DGDLGDSCRA HVGELALV
|
| |