Gene Rpic12D_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2430 
SymbolmutL 
ID8020094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2549812 
End bp2551719 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content68% 
IMG OID644831211 
ProductDNA mismatch repair protein 
Protein accessionYP_002982374 
Protein GI241664014 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CCTCGACTTC CCGCCGCCCC ATCCGCCCGC TTCCCGACCA GTTGATCAGC 
CAGATCGCGG CCGGCGAGGT GGTCGAACGG CCGGCGTCCG TGGTCAAGGA ACTGCTGGAA
AACGCACTGG ACGCCGGTGC CACACAGCTC CAGATCAAGC TGGAGGAAGG TGGCGTGCGG
CGCATTGCCA TCACCGACAA CGGCGTCGGC ATTCCGGCCG ACGAACTGCC CGTCGCGCTG
ATGCGGCATG CGACCAGCAA GATCGGCTCG CTGGAAGAGT TGGAATCGGT GGCGACGCTG
GGGTTTCGCG GCGAGGCACT GGCCTCGATT GCCTCGGTGG CGGAGTTGAC GCTCACGTCG
CGCACCGCCA ATGACGCCCA CGCCACGCAG ATCATCGCGC AAACCGGGCG GGCCCAGCCG
GCCTCGGGCG GTGTCGGCAC CACCGTCGAT GTGCAGCATC TGTACTTCAA CACGCCGGCG
CGCCGCAAAT TCCTGAAGAC CGAGCAGACC GAGCTGGGCC ATTGCATGGA AGTGATCCGG
CGCACCGCGC TGGCGCGGCC CGACGTGGCC ATCTCCGTGC ATCACAACGG CAAGCCGCTG
GAGCATTGGA ACGCCACACA AGCGGATTCA CGCTCAGCAG CCGTGCTCGG CACCGAATTC
GCCCGCGCAC GCCTGCCTTT CGAGGAATCG GCCGGCGAAC TGCGCCTGTT CGGCTTTGCC
GGCCTGCCGA CCGCCTCGCG CGGCAGGGCC GACCACCAGT TCTTCTACGT CAACGGCCGT
TTCGTGCGCG ATCGCCTGCT GACGCATGCC GTGCGCAGCG CCTACGAAGA TGTGCTCCAT
GGCGACCGCT TCCCGGCCTA CGTGCTGTGC CTGGAGTTGC CGCCCGAAGC GGTGGACGTC
AACGTGCACC CGTCCAAGAT CGAGGTGCGC TTCCGCGACA GCCGCGCGGT GCACCAGTTC
GTCTATCACG CGGTGCAGCG CGCCCTGTCC CGCCACGCCG GCGAACAAGG GGATAGCCTG
CGCACCGACA TCGCCGACGC GCATGATGTT GCCGGGGTCA CGACGGCGCC CTCGCCCGCC
GACAACACCA CGCGCTGGAT CAACCAGATG GCCGCGCGGC AGACGTCGCT CGGCATTGCG
CAGCCGCGTG CGGAATACCT GTCGATGATG CGCGGCGATA GCACACCCAT GCCGGCGATG
CGCCCCGCCT GGATGACCGA CGTGCCGAGC GCGGCAACGT TGTTCGACGG CGGCACCGCG
ACCGCGCAAG CAGCTGCTGC CGTTGCCGAA CCGGTCGCAG CACCACCCGC CGATAACGAC
GATGCCCACC CGCTCGGCTT TGCCGTCGCC CAGTTGCACG GCATCTACGT GCTGGCGCAG
AACACGCGCG GCATGGTGCT CGTCGACATG CACGCCGCGC ACGAGCGCAT CCTCTATGAA
CAACTCAAGA CCGCGCTCGA AGCCAGGCGC GTCGAGGTGC AACCGCTCCT GATTCCGGTC
ACGTTTGCCG CAAGCCCGGT GGAGATCGGC ACCGCAGAGG AATTCCGCGA CACGCTCACG
CTGCTCGGCT TTGACATCTC CGCCGTGTCG CCCACCACGC TGGCCGTGCG ATCGGTGCCG
ACACTGCTGC AGAAGGCCGA TGCGCAGGCG CTCGCGCGCG ACGTGCTGCG CGATCTGCAC
GCGTACGGCG GCTCGCGCGT GCTGGCCGAA CGCCAGAACG AGCTGCTGGC CACGTTGGCG
TGCCACTCTG CCGTGCGTGC CAACCGCCGG TTGAACCTGG ACGAGATGAA CGCGCTGCTG
CGCCAGATGG AAGCCACCGA ACGCGCCGAC CAGTGCAATC ACGGCCGCCC GACATGGATC
CAGTTGACCG TGGCTGACCT GGATCGCCTC TTCCTGCGTG GCCAGTAA
 
Protein sequence
MTSASTSRRP IRPLPDQLIS QIAAGEVVER PASVVKELLE NALDAGATQL QIKLEEGGVR 
RIAITDNGVG IPADELPVAL MRHATSKIGS LEELESVATL GFRGEALASI ASVAELTLTS
RTANDAHATQ IIAQTGRAQP ASGGVGTTVD VQHLYFNTPA RRKFLKTEQT ELGHCMEVIR
RTALARPDVA ISVHHNGKPL EHWNATQADS RSAAVLGTEF ARARLPFEES AGELRLFGFA
GLPTASRGRA DHQFFYVNGR FVRDRLLTHA VRSAYEDVLH GDRFPAYVLC LELPPEAVDV
NVHPSKIEVR FRDSRAVHQF VYHAVQRALS RHAGEQGDSL RTDIADAHDV AGVTTAPSPA
DNTTRWINQM AARQTSLGIA QPRAEYLSMM RGDSTPMPAM RPAWMTDVPS AATLFDGGTA
TAQAAAAVAE PVAAPPADND DAHPLGFAVA QLHGIYVLAQ NTRGMVLVDM HAAHERILYE
QLKTALEARR VEVQPLLIPV TFAASPVEIG TAEEFRDTLT LLGFDISAVS PTTLAVRSVP
TLLQKADAQA LARDVLRDLH AYGGSRVLAE RQNELLATLA CHSAVRANRR LNLDEMNALL
RQMEATERAD QCNHGRPTWI QLTVADLDRL FLRGQ