Gene Rpic12D_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2389 
Symbol 
ID8020053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2511726 
End bp2512526 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID644831171 
ProductABC transporter related 
Protein accessionYP_002982334 
Protein GI241663974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA CGAATGCGAA CCCGCAAACG CTCAAATCCG CGCTGGATGT TCCCATGATC 
GAGATCCGGG GGCTCACCAA ATCGTATGGC GATCACACCG TGCTCAAGGG CATCGACTTT
GAAGTTGACG CGTCGCAGGT GGTCGTCGTC ATCGGCCCCA GCGGCTCTGG CAAGAGCACG
TTCCTGCGCT GCTGCAACGG GCTGGAAACA GCCGAAGGCG GCACCATCGA CATCTGCGGC
AAGCGCCTGA TCGACAACGG CACGGTATTG CCCGATGGCG AGCTGAACCA GTTGCGCCAG
CAGGTCGGCA TGGTGTTCCA GTCGTTCAAC CTGTTTCCGC ATCTTTCGGT GCTGCACAAC
GTCACCGTTG GCCCGCGCAT GCTGAGCGGC AAGTCGAAGC ACGAAGCAGA GACGGAAGCG
CGCGAGCTGC TGCAGAAAGT GGGCTTGGCA CACAAGGCCG ACGCCATGCC CGCGAGTCTG
TCGGGCGGAC AGAAGCAGCG CGTGGCCATT GCGCGTGCGC TGGCGATGCG GCCCAAGGTG
ATGCTGTTCG ACGAACCGAC CTCCGCGCTT GACCCAGAAC TGGTTGGCGA AGTGCTTCAG
GTGATGAAGG TGCTCGCCAA GGAAGGCATG ACGATGCTCG TGGTCACGCA CGAGATGGGC
TTTGCACGCG AAGTGGCCGA CGTGGTGGTG GTGATGGACG GCGGCGGCAT CGTCGAAGCC
GGGCCGCCGT CGGTCATCTT CGGCGAGCCC AAGGAAGCGC GCACGCGTTC GTTCCTGCAA
GCGGTGCTGA CACGCGCATG A
 
Protein sequence
MNMTNANPQT LKSALDVPMI EIRGLTKSYG DHTVLKGIDF EVDASQVVVV IGPSGSGKST 
FLRCCNGLET AEGGTIDICG KRLIDNGTVL PDGELNQLRQ QVGMVFQSFN LFPHLSVLHN
VTVGPRMLSG KSKHEAETEA RELLQKVGLA HKADAMPASL SGGQKQRVAI ARALAMRPKV
MLFDEPTSAL DPELVGEVLQ VMKVLAKEGM TMLVVTHEMG FAREVADVVV VMDGGGIVEA
GPPSVIFGEP KEARTRSFLQ AVLTRA