Gene Rpic12D_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2242 
Symbol 
ID8019906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2384734 
End bp2385276 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content61% 
IMG OID644831025 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_002982188 
Protein GI241663828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.589503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATTC AGCTTTTCGG CGATAGCACA GTCGACCAAG AGGCAGCCTA TTGGCAGTCC 
CAATGGCCCG GACACGTCGT CAACAACGCC GTGAGCGGCA CCACCAGCGC GCAACTGCGC
GCGGGAACGG ACGGCTCAAA TCTCCCTTGG CCGAACTCGG TTGACGACAA CGCCGATTAC
ATCGTGATCG GTCATGGTGC CAACGATTCG ACCTACGCAG CCGGCAGCAC CGTCGATCAG
TTCAAAGACA ACTTGCGCTT CTTTGCCAGG AACGCGAAGC ACGCGAAAGT CATTTTCATG
ACGCCGCTGC CGTCTATCAC ACCGTGGCGC ATGGACGTTC TGCCCCCCTA CGCACAAGCC
ATGCGCGACG TCGCGAAGGA GGTGGGAGCC ATGTTGATCG ACCGGGATGC TTGCTGGCGC
GCGCGCCCAG ACTGGCAGAC GCTGCTGTAC GACGGAACCC ACGCGACACC GGATGGACGG
GAGTGGTCAG TCGACCATTG CGCGGCTCCC GTCATTGGTC CGTTTCTGCA GCCCCTTGCT
TGA
 
Protein sequence
MRIQLFGDST VDQEAAYWQS QWPGHVVNNA VSGTTSAQLR AGTDGSNLPW PNSVDDNADY 
IVIGHGANDS TYAAGSTVDQ FKDNLRFFAR NAKHAKVIFM TPLPSITPWR MDVLPPYAQA
MRDVAKEVGA MLIDRDACWR ARPDWQTLLY DGTHATPDGR EWSVDHCAAP VIGPFLQPLA