Gene Rpic12D_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2113 
Symbol 
ID8019774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2256295 
End bp2257053 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID644830897 
Productprotein of unknown function DUF347 
Protein accessionYP_002982062 
Protein GI241663702 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT CAACAGAGCA CGCTCTGGCC AAAGTGCCAG AAGTCACACT GGCCTTTTGG 
CTACTCAAGA TTGCGGCCAC CACACTGGGC GAAACCGGTG GTGATGCTGT CTCGATGTCG
ATGAACCTGG GCTATCTGGT GGGCACCGGC ATCTTTGCCG CCGTCTTCTT GGTGTCGGTA
GCCGCACAAA TAAGAGCCAA GGGCTTTCAT CCGCTTCTCT ACTGGACCAC CATCATCGCC
ACGACCACGG TCGGCACGAC GCTGGCAGAC TTCGCGGATC GCTCTTTGGG TATCGGATAT
GCAGGCGGCT CCACCTTGCT GCTGGTACTG CTGCTCGGCT CTCTTTTCGC CTGGTACCGC
ACGTTGGGGT CGGTGTCGGT GAGCACCGTC CACTCGCCCA AGGCTGAAGC GTTCTATTGG
GTCACCATCA TGTTTTCGCA GACCTTGGGC ACGGCCCTGG GCGATTGGAC GGCAGATACG
GCGGGCTTGG GGTACACAGG GGCGGCCGTG GTCTTCGGGG CGCTGCTTGC GCTCATCATC
GCCGCCTACT ACTGGACCCG CGCTTCCCGC ACACTGCTGT TCTGGGCCGC GTTCATCCTG
ACACGCCCCT TGGGCGCCGT GGTTGGCGAC TTTCTCGACA AACCGCACAG CGCTGGTGGG
CTCGCTTTGA GCCGCTACTC CGCGTCGGCC GCACTGCTTG CCTTTATCCT GACCGGCATG
CTGCTCTTCA GGCAACGCGC AGCTCGGGTT GCCCATTGA
 
Protein sequence
MKTSTEHALA KVPEVTLAFW LLKIAATTLG ETGGDAVSMS MNLGYLVGTG IFAAVFLVSV 
AAQIRAKGFH PLLYWTTIIA TTTVGTTLAD FADRSLGIGY AGGSTLLLVL LLGSLFAWYR
TLGSVSVSTV HSPKAEAFYW VTIMFSQTLG TALGDWTADT AGLGYTGAAV VFGALLALII
AAYYWTRASR TLLFWAAFIL TRPLGAVVGD FLDKPHSAGG LALSRYSASA ALLAFILTGM
LLFRQRAARV AH