Gene Rpic12D_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2109 
Symbol 
ID8019770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2253368 
End bp2254279 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID644830893 
Productputative acyltransferase 
Protein accessionYP_002982058 
Protein GI241663698 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCGCG TCCTGCCTGC CTTCTTACTG GGCACGTTTA GCTCAATCCT GCTTGCCTTG 
AACACGCTGT TCTGGAGCGT GCCGCTGTTC ACGCTGTCAG CGTTCAAGCT GCTGGTGCCG
GCAGTGGCCG TCCGCCGACG GATCGACCCG ATGCTCAACT GGGTCGCAAC GCGCTGGATC
GGTTGCAACA ATGCCTGGAT CGGCGTGCTG CAACGTGAGC CGTGGAGCGT GGAAGGCGCC
GACAACCTGC GCTACGCGGG TTGGTACCTC GTCAATTGCA ACCATCGGTC TTGGGTGGAC
ATCTTCGTGT TGCAGCGGGT GTTGAACCGG CGCATCCCAC TGCTCAAGTT CTTCCTCAAG
CAACAGCTGA TCTACGTGCC GGTCATCGGC CTGGCCTGGT GGGCGCTGGA TTTTCCGTTC
ATGCGGCGGC ACTCCAAGGC GGCGCTGCGC AAGCACCCCG AGCTGCGCAA TCAAGATCGC
GAAACCACGC GTCGCGCCTG TGCCAAGTTC GCGCACGTGC CGACCAGCGT CATGAACTTT
GCCGAAGGCA CGCGGTACAC CCCGGCAAAG CACCGGACGC AGTCGTCCCC CTATCGTCAT
CTGCTCAAGC CGAAGGCCGG CGCCCTGGCC CTGACGCTCA ACGCCATGGG CGGAAGGTTC
CAGTCGCTGC TCGATATCAG CATCGCCTAT CCGGACGGCA CACCGAGCTT CTGGCAACTG
GCCTCCGGCC ACGCCGGCCG GGTGATGGTG CATATCCGCG AGCTGCCGAT CCCGCCGGAT
TTCTGCACGC ACGACTACAG CACCGACTCA GCCTTTCGCA GCGATTTTCA CCGCTGGCTC
ACCGAACTCT GGGAGGAGAA AGACCAGCAG ATCGAAAACA TGCTGGCGCA GGCAGCCAAC
CGCGTGGCGT AG
 
Protein sequence
MIRVLPAFLL GTFSSILLAL NTLFWSVPLF TLSAFKLLVP AVAVRRRIDP MLNWVATRWI 
GCNNAWIGVL QREPWSVEGA DNLRYAGWYL VNCNHRSWVD IFVLQRVLNR RIPLLKFFLK
QQLIYVPVIG LAWWALDFPF MRRHSKAALR KHPELRNQDR ETTRRACAKF AHVPTSVMNF
AEGTRYTPAK HRTQSSPYRH LLKPKAGALA LTLNAMGGRF QSLLDISIAY PDGTPSFWQL
ASGHAGRVMV HIRELPIPPD FCTHDYSTDS AFRSDFHRWL TELWEEKDQQ IENMLAQAAN
RVA