Gene Rpic12D_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2062 
Symbol 
ID8019723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2198993 
End bp2199805 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID644830848 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_002982013 
Protein GI241663653 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TTGAACACGA TAACGTCCGC TTGTATCACG AATTCGATGA CGGCCCCGCC 
ACGGGTAAGC CGGTGCTGGT GCTGTCGAAT TCGCTCGGCA CCAACCTCGG TATGTGGGAG
CCGCAGCTCG ACGCGTTGCG CCAGCATTTC CGCCTGCTGC GCTATGACCA GCGCGGCCAC
GGGCAATCGA GCGTGCCGGA CGCGCCGTTT GGCGTCGCGC AACTCGGTGG TGATGTGCTC
GCGCTGCTCG ACCACTACAA CATTGAGCTT GCGCTGTTCT GCGGTCTGTC GATGGGCGGG
TTGACCGGCC TGTGGCTGGC CGCACATCAC GGCGAGCGTT TCCCGCGCAT GGTCGTGACG
AATACCGCCG CGCTCATCGG CACGCAGCAA AGCTGGAATA CGCGCATCGC ACAGGTCGAG
CAGGGCGGCA TGGCGAGCAT TACTGAAACG GTGCTCGAGC GCTGGTTCAC GCAGGGCTAC
CGGGATGCCA ACGCTAGCCG CGTCGACATC GTCAAGGCAA TGTTGCTGTC CACGCCGGAT
GCCGGCTACA ACGGCAACTG CGCAGCCATT CGCGATGCAG ATTTGCGCGC GCAATTGCCG
AACATCCGCG TGCCGATGCT GGTGATTGGC GGCACGCACG ATATTTCCAC GCCGGCTGCA
CAGACCAAGC TCATTGCCGA CGGCGTGCCC GGCGCCCAGT ACATCGAGCT TTCAGCCGGC
CACCTCGCCA ACTGGGAGCA AGCCGACGGC TACACCGAAG CGCTGGTCAG CTTCTTGACG
ACCGGCGTTG CGCGCGAGGT TGCCCATGGA TGA
 
Protein sequence
MPWLEHDNVR LYHEFDDGPA TGKPVLVLSN SLGTNLGMWE PQLDALRQHF RLLRYDQRGH 
GQSSVPDAPF GVAQLGGDVL ALLDHYNIEL ALFCGLSMGG LTGLWLAAHH GERFPRMVVT
NTAALIGTQQ SWNTRIAQVE QGGMASITET VLERWFTQGY RDANASRVDI VKAMLLSTPD
AGYNGNCAAI RDADLRAQLP NIRVPMLVIG GTHDISTPAA QTKLIADGVP GAQYIELSAG
HLANWEQADG YTEALVSFLT TGVAREVAHG