Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2019 |
Symbol | |
ID | 8019679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2146038 |
End bp | 2149349 |
Gene Length | 3312 bp |
Protein Length | 1103 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830805 |
Product | Carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_002981971 |
Protein GI | 241663611 |
COG category | [C] Energy production and conversion |
COG ID | [COG1038] Pyruvate carboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTTTC GCAAACTGCT GATCGCCAAT CGCGGCGAGA TCGCCATTCG CATTGCCCGC GCAGCCGCCG CAATGGGCTT GCCCTCCGTT GCCGTCTATT CCGAAGACGA CCGCGACGCA CTGCATCCCC TTCGCACCGA TGAAGCCGTG CCGTTGCCCG GCACCGGCCC GCGTGCCTAT CTCAACGGCG CGGCAATCCT CGCTGCCGCA CGGGCCGTCG GCGCCGATGC TGTTCATCCG GGCTATGGCT TCTTGAGCGA GAACGCTGCC TTCGCACGCC AGTGCGCGCA GGCTGGCGTG CAATTCGTCG GACCGTCCCC GCACGTGCTT GACCTCTTCG GCGACAAGGC ACGCGCTCGG GCGCTTGCGC ATGAGGCGGG CATTCCCATC GTCAGTGGCA CGCTAGGCGC AACCACCCTT GAAGAGGCGC GCGCGTTCTT CGCCGCGCTG CCACACTCGC ACGGCATGAT GATCAAGGCC GTGGCGGGCG GCGGCGGGCG CGGCATGCGC GCCGTGCACG ATGCGCAGGC GATTGCCGAC GCGTATGCGC GCTGCGTATC TGAAGCTACG GCTACCGGTG GTGGCGGCGA TGTCTATGTG GAAGCGCTGG TACCTGCACC GCGCCATATC GAAATCCAGA TCATTGCTGA CGCACGGGGC CACGTCATGC ATCTCGGCGA GCGCGAATGC AGCCTGCAGC GCCGTCACCA GAAACTGATC GAGATCGCGC CCAGCCCATC GCTGGACGAC GCCCTGCGCA CGCGCATCGC CGACGCGGCC GTCACGCTCG CCAAAGCGGC AGGCTACAGC GGCATCGGGA CATTGGAGTT CCTAGTGGAA AACGCAGGCG CACCGGACGC CACGTTCTAT TTCATGGAAG CCAACCCACG CGTGCAAGTC GAGCACACCG TCACGGAGAT GGTGACGGGC GTCGACTTGG TGGTGACACA ACTGGCGCTG GCGCAAGGCG CTTCGCTCAC GGACTTGGGG CTTGCTAGGC CGGTCGCACC GCGCGGCCAC GCCGTTCAAG TACGCATCAA CGCAGAGACC CTTGATGCAA GCGGCCAGCC GCATCCCTCC ACTGGCACGC TCACCGCATT CGAGGCGCCC AACGGCCCCG GTGTGCGCGT CGACACCTGC GGTTATGCGG GCTACCGTCC GAACCCGCGC TTCGATTCGC TGCTGGCTAA ATTGATCGTC CACGCACCGT ACGGCACGTA TGCGCAGACG CTGGCACAGA CGTACCGCGC GCTGTGCGAA TTCCGCATCG AAGGGCTGGC CACCAACAAG CGGCTGCTGC AGGACCTGCT GCGCGACGCC GACGTGCAAG CCAACGCCGT GCATACGCAG TTTCTCGATG CGAAGCTCGC CGACCTGGCA GCCGGCAACG GTGAAGCGCA CCCTGCCCTG CACGCTACGT CGGTCACCAC CCCGGATATG ACGCCCGTTA CGTCATTCCT CGATGAGCTT CCTGACAATG CTGAAGAGCT CACCGCGCCC ATGGATGGCG CGCTGATCCA GATGCATGCG CAAGCCGGCG CCACGGTCGC GCGCGGCGAG GTGCTGGCCG TCATTGAAGC AATGAAGATG GAGCACGTCG TCATCGCACC CGCGGCCGGA CGCGTGCTGC AAGTCTGCGC GCAGTCGGGC GCAACGGTGC GCGAAGGCCA GCCGCTTGCC GTGCTGCAGC CCAGCGATGC CCAACACGAG AGTGCCGCAG CCGACGCAGA GATCGACCTC GACCACATTC GCCCCGACCT GCAGGCCGTC ATCGACCGCC ATGCGTTTGG CCTCGACGCT AACCGCCCGG ATGCCGTTGC CCGCCGCCGC AAGACCGGCC AGCGCACCGC ACGCGAGAAC ATCGACCACT TGTGCGACGC CGGTTCATTC ATCGAGTACG GCGCACTTGC CATCGCAGCG CAACGCCAGC GGCGCGCACT CGACGATCTG ATCCGCTCGA CGCCGGCCGA CGGCATCATC ACCGGCATCG GAACCGTCAA CGGCTCGCAC TTCCCCGATC AGGACGCGCG CTGCATGGTG CTCGCGTATG ACTACACCGT GCTGGCGGGC ACCCAGGGCA CCTTCAACCA CAAGAAGACC GACCGTGCAC TGGAGCTGGC GCAGCAATGG AAGCTGCCCG TTGTGCTGTT CGCCGAAGGC GGCGGCGGTC GGCCGGGCGA CACTGAAAAG CGTGGCGTCA GCGGCCTGGA CTGCCCGACC TTCATTCACT TCGCACGGCT CTCTGGGCTG GTGCCGACCA TCGGTATCGT GTCGGGCCGC TGCTTTGCAG GTAACGCTGC GCTGCTGGGC TGCGCAGACG TGATCATCGC AACGCGCGAC GCGACCATCG GCATGGGCGG CCCCGCCATG ATTGAAGGCG GCGGCCTTGG CGTATACGCA CCCGAAGAAG TTGGCCCTGT TAGCGTGCAG GCGCCCAATG GGGTGATCGA TGTGCTGGTC GACGACGAGA CCGAAGCCGT CGATGCGGCA CGCCGTTACC TGAGCTACTT CCAGGGCCCG CTTGCCAGTT GGGAGGCCGG CGACGTGCGC CACCTGCGCC ACGCGATTCC CGAAAACCGT ATGCGCAGCT ACGACATGCG CGGCGTGATC GACGCGTTGG CCGACACAGG TTCGGTTCTG GAACTGCGTC AAGCATTTGG CCTGGGCATC ATCACCGCGC TGATCCGTAT CGAAGGTCGC GCCTTCGGCT GCATCGCCAA CAACCCGCGC CACCTGGGCG GCGCAATCGA TTCTGCGGCA GCGGACAAGG CGTCACGCTT CATGCAGTTG TGCAACGCGT TCGACCTGCC CATCGTCTCA CTGTGCGACA CACCGGGTTT CATGGTCGGG CCCGAAGCGG AAAAAACCGC CACCGTACGC CACGTCAGCC GCATGTTCGT GACGGCCGGC AACCTGCGCG TGCCTTTCTT CACCGTCGTG CTGCGCAAAG GCTACGGCCT TGGGGCGATG GCCATGGCCG CGGGCGGTTT CCAGGCGCCG TTCTTCACCG CTTCATGGCC CAGCGGCGAA TTCGGTGGCA TGGGCATCGA AGGCGCCATC CGCCTGGGGT TCCGCAAAGA GCTGGAAGCG GTGGAAGACC GCGCCGAGCG CGAGGCGCTG TTCCGCAAGA TGGTCGAGGC CGCCTACGAG GAAGGCCGCG CGCTCAACAT CGCCAGCTAT CTCGAAATCG ACGCCGTGAT CGACCCGGCC GATACGCGCC GCTGGCTGCT GCGCGGGCTG CAATCGGCGC CGCCCGCACC GCCAAGGCAC ACACGCGACC CCGCCACCCG CCGCTTCATC GACACCTGGT AG
|
Protein sequence | MTFRKLLIAN RGEIAIRIAR AAAAMGLPSV AVYSEDDRDA LHPLRTDEAV PLPGTGPRAY LNGAAILAAA RAVGADAVHP GYGFLSENAA FARQCAQAGV QFVGPSPHVL DLFGDKARAR ALAHEAGIPI VSGTLGATTL EEARAFFAAL PHSHGMMIKA VAGGGGRGMR AVHDAQAIAD AYARCVSEAT ATGGGGDVYV EALVPAPRHI EIQIIADARG HVMHLGEREC SLQRRHQKLI EIAPSPSLDD ALRTRIADAA VTLAKAAGYS GIGTLEFLVE NAGAPDATFY FMEANPRVQV EHTVTEMVTG VDLVVTQLAL AQGASLTDLG LARPVAPRGH AVQVRINAET LDASGQPHPS TGTLTAFEAP NGPGVRVDTC GYAGYRPNPR FDSLLAKLIV HAPYGTYAQT LAQTYRALCE FRIEGLATNK RLLQDLLRDA DVQANAVHTQ FLDAKLADLA AGNGEAHPAL HATSVTTPDM TPVTSFLDEL PDNAEELTAP MDGALIQMHA QAGATVARGE VLAVIEAMKM EHVVIAPAAG RVLQVCAQSG ATVREGQPLA VLQPSDAQHE SAAADAEIDL DHIRPDLQAV IDRHAFGLDA NRPDAVARRR KTGQRTAREN IDHLCDAGSF IEYGALAIAA QRQRRALDDL IRSTPADGII TGIGTVNGSH FPDQDARCMV LAYDYTVLAG TQGTFNHKKT DRALELAQQW KLPVVLFAEG GGGRPGDTEK RGVSGLDCPT FIHFARLSGL VPTIGIVSGR CFAGNAALLG CADVIIATRD ATIGMGGPAM IEGGGLGVYA PEEVGPVSVQ APNGVIDVLV DDETEAVDAA RRYLSYFQGP LASWEAGDVR HLRHAIPENR MRSYDMRGVI DALADTGSVL ELRQAFGLGI ITALIRIEGR AFGCIANNPR HLGGAIDSAA ADKASRFMQL CNAFDLPIVS LCDTPGFMVG PEAEKTATVR HVSRMFVTAG NLRVPFFTVV LRKGYGLGAM AMAAGGFQAP FFTASWPSGE FGGMGIEGAI RLGFRKELEA VEDRAEREAL FRKMVEAAYE EGRALNIASY LEIDAVIDPA DTRRWLLRGL QSAPPAPPRH TRDPATRRFI DTW
|
| |