| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2005 |
|---|
| Symbol | |
|---|
| ID | 8019665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2130954 |
|---|
| End bp | 2131727 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830791 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002981957 |
|---|
| Protein GI | 241663597 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.983134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.586584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAT CCAATCGAGC TACGCTCGCC GTCATCATCG TCGCCAAGAA CGAAGCCGCC
GATATCGGCG ACTGCATCCG CTCGGTGCGC GACTGGGCGG ACGACGTCAT CGTCTTCGAC
TCGGGCAGCA CGGATGGCAC GCAGGACATC TGCCGCCAGC TCGGTGCGCG CGTGTTCGAG
ACGGACTGGC CGGGCTACGG CGAGCAGTCC AACCGCGCGT TGCGCGAAGC CCGCACAGAC
TGGGTGCTCT CACTGGATGC CGACGAGCGC ATCAGCCCCG AGTTGCGGGC CGAGATGATC
GCCGTACTGG AATCGGGCAG CCCGCACACT GTCTACTCCA TGCCGCGCAG CTCGAGTTTT
TGTGGCCGCT TCATGAAGCA TTCGGGCTGG TGGCCGGACC GCATTCGTCG CTTCTTCAAG
CGCGAGCAGG TGACGTTCTT CGATGCGCCG GTGCACTCGC ACCTGGTCTT CGAGGGTACG
GTGGGCGATT TCCGCGCCCC GATCATCCAT TATTCGATTC CTGACCTGAA GGCTGCACTC
GACAAGGCCA ACGATTATTC GACCGCCGGT GCCGCTGCGG CTTATGCCAA GGGCAAGCGC
GCGTCCTTGG GCAGTGCCAT CGGCCACGGG CTGTGGGCGT TCATCCGTAC GTACATCATC
CAGCGGGGTT TCCTCGATGG GGCGGAGGGC TTCATGCTGG CCGTGTCGAA CGCTGAGGGC
ACGTATTACC GCTACGTCAA GCTGATGATG CTGCATCGTC ATGGCAAGCG CTGA
|
|---|
| Protein sequence | MPASNRATLA VIIVAKNEAA DIGDCIRSVR DWADDVIVFD SGSTDGTQDI CRQLGARVFE
TDWPGYGEQS NRALREARTD WVLSLDADER ISPELRAEMI AVLESGSPHT VYSMPRSSSF
CGRFMKHSGW WPDRIRRFFK REQVTFFDAP VHSHLVFEGT VGDFRAPIIH YSIPDLKAAL
DKANDYSTAG AAAAYAKGKR ASLGSAIGHG LWAFIRTYII QRGFLDGAEG FMLAVSNAEG
TYYRYVKLMM LHRHGKR
|
|---|
| |