| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1966 |
|---|
| Symbol | |
|---|
| ID | 8019626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2090572 |
|---|
| End bp | 2091204 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830752 |
|---|
| Product | signal peptide protein |
|---|
| Protein accession | YP_002981918 |
|---|
| Protein GI | 241663558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.874063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCG TACTCCGCCG AACCGCTCTC TCGTTCGTCG CCGCAGCCTC GGTTGCAGGC
GCTGGCCTGG TCCACGCGCA AGCAAGCGCA CCACAAGCAC CGGCAGTAAC CACGGCTGCG
TCGGGCGGCA CCGTCGCTGA ACTGCAGCAG TTACTGGCGC AGAAGCGTCT GACCGAACTG
CGCACGACCT ACAACGGCGA CTACGGCACG AGCCTGCTGC TCGTCAACGA AGACACCACG
GCCTACGTGG CCCTGTCGTA TCGCAAAGAA TTGTGGCGTG TGTACAAGTT TGCGTCGGCC
GCTCCGGCCG AAGGCGCATA CGAAACGCTG GCCAGCCAGA CCCGGACGTG GGCCGAAGAT
GATCTGCGCC GCGCCGTCAC GGCGGGCCAA AAGGCGCAAC TGGAGCGCGA AGCCCAGGCA
GCCCAGCAGC GCGCCGCATC TCTCAGCCAG GAAGTGCGCA TCATGCAGGC GCAGCGTCAG
AAAATGCTGA CCGAACAGCA GACCATGCGT CAGGAGACGA AGGCGCTGGA CATCGAGCGC
CGCGCATACC AGACCCAGGT CGAATCGCTG CAGCAGCAGA TCCGCTTGCT GGAAAAACAG
CTCAACGATC CGCACTGGTC GCCAGCACCT TAA
|
|---|
| Protein sequence | MSLVLRRTAL SFVAAASVAG AGLVHAQASA PQAPAVTTAA SGGTVAELQQ LLAQKRLTEL
RTTYNGDYGT SLLLVNEDTT AYVALSYRKE LWRVYKFASA APAEGAYETL ASQTRTWAED
DLRRAVTAGQ KAQLEREAQA AQQRAASLSQ EVRIMQAQRQ KMLTEQQTMR QETKALDIER
RAYQTQVESL QQQIRLLEKQ LNDPHWSPAP
|
|---|
| |