| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1953 |
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| Symbol | |
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| ID | 8019612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2078256 |
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| End bp | 2080538 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830738 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002981905 |
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| Protein GI | 241663545 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.132453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCGC AGGCAGCCAA GCCAGAAGGC GGCGACACGT TATTCATCGA TGCGGTACTG
GAACAGACCT ATCGGCATCT GTTCGGCCCG ACCTCGCAGC CCGCGGCCCC GCCGCGCCAG
CAGGTCGTCT CCATTTCGGG GCTGACCGAA AAGCTGTCTT ACCTGAAACC GGCCGACCTC
AAGCTGGTAA AGGAAGCGTT CCACTTTTCA GACGAGGCGC ACCTCGGGCA GTACCGCCAG
AGTGGCGAGC CTTACATCAC GCATCCCGTG GCCGTCGCAG AGATCTGCGC GGGCTGGAAG
CTGGATGTGC AATCGATCAT GGCGGCGCTG CTGCACGACG TGATCGAAGA CCAGGGCGTG
ACCAAAAGCG AGCTGGCCGA GAAGTTCGGC CCGAAGGTCG CAGAACTGGT CGACGGCCTG
ACCAAGTTGG ACAAGCTCGA ATTCCAGAGC CGGGAGCAGG CGCAAGCCGA GAGCTTCCGC
AAGATGCTGC TCGCGATGGC GCGCGATGTG CGCGTGATTC TCGTCAAGTT GGCCGATCGT
ACGCACAACA TGCGCACGCT CGACCACGTG CCGCCGGAGA AGCGGCGCCG CATTGCCGGC
GAGACGATGG AGATTTACGC GCCGATCGCG CACCGCCTCG GCCTGAATAC GACGTATCGG
GAGTTGCAGG AACTGAGTTT CCGTATCGGT TCGCCGTTCC GGTATGCCAC GCTCGAGAAA
GCGGTGAAGG CCGCGCGCGG CAATCGACGC GAAGTCGTGA GCCGCATTCT CGAAACGGCT
CAGCGTGCGC TGACCGATGC GGGCATTCCG GCCGAGATGA CTGGCCGCGA AAAAACGCTG
TACAGCATCT ACCGCAAGAT GCACGACAAG CAGTTGTCGT TTTCGCAGGT GCTGGACGTG
TATGGATTCC GCGTGGTGGT CGACACGCAG ATGCAGTGCT ACATGACGAT GGGTGCGCTG
CACAGTCTGT ACAAACCGAT GCCCGGCAAG TTCAAGGATT ACATCGCCAT CCCCAAGATC
AACGGTTATC AGTCGCTGCA CACGACGCTG GTGGGGCCGT TCGGCACGCC GGTCGAGTTC
CAGATCCGCA CGCGCGAGAT GAACCAGATT GCGGAAGCCG GCGTGGCCGC GCACTGGATG
TACAAGCAGC ACCATGACGA GCCGGACCGC GCGCAGCAAC AAGCGCATCA GTGGTTGCAA
TCGCTGCTCG ACATTCAAAG CCAGACGGGG GATTCGCAAG AGTTTCTAGA GCACGTCAAG
ATCGACCTGT TCCCGGATGC GGTCTACGTG TTCACGCCCA AGGGCGAGAT CCGAGCACTG
CCGCGCGGTG CGACGGCGCT GGACTTCGCC TACGCGGTGC ACAGTGACCT TGGCAACCAG
TGCGTGGCCG TCAAGATCAA CAACGAGCTG CTGCCGCTGC GCACGGAGCT GAAGAACGGC
GACATCGTCG AGGTGGTGAC GGCGCCGTAT TCGAAGCCGA ACCCGGCATG GCTTACGTTT
GTGCGCACGG GCAAGGCGCG CGCGGCGATC CGGCATTTCC TCAAGACGGC CAAGCTGGAC
GAGGCGATTC AACTCGGCGA GCGTTTGCTC GAACAGGCGC TGCGCCAGAT CGGCATCGAC
ATGAAGGCTG TATCCGCCCA GGTGTGGGAG CGCGTTGTGC AGTGGACGGG CAACAAGGCG
CGCGAAGACG TGTTTGCGGA TCTGGCACTC GGCCGCCGCG TGGCCGCGGT GGTCGCGCGC
CGCCTGGAAA TCCTCTTGCA GGAAGGCGGG CACGAGGGCG ATGAAGCTTT GATGGCGGCC
GTACACACCT TCGCGGGGGA CGAGGCGCCT GCCGTCACCG TGAGTGGCGA CGAAGGCATG
GCGATGGTGT TCTCGCCGTG CTGCCGCCCG ATTCCCGGCG ACCCGATCGT CGGCTATATC
GGCAAGGGCG AAGGCTTGCA GATCCACGTG CAGGAATGCC GCGTGGCCAA GCGCCTGCAT
GGCAAGGATC CGGAGCACTG GATCGACGTC ATGTGGGCAG AGCACACGAC GCGCGCGTTC
GACGTGTCGA TCAAGGTGCT GGTGCGCAAT ACGAAGGGCA TCCTGGCGCG CGTCGCCGCC
GACTTGACGT CGGCCGATGC CAACGTGGCA CACGTATCGA TGGAGCAGGA GGGCTATCAG
GAAGCGACGT ACATGACGTT CCTGATCCAG GTGCACGACC GCGTGCACTT GGCCGATGTG
ATGCGCGCGT TGCGACGGAA CCCGGATGTG ATTCGCATTG CGCGAGATCG CGGTGGAGAT
TGA
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| Protein sequence | MPAQAAKPEG GDTLFIDAVL EQTYRHLFGP TSQPAAPPRQ QVVSISGLTE KLSYLKPADL
KLVKEAFHFS DEAHLGQYRQ SGEPYITHPV AVAEICAGWK LDVQSIMAAL LHDVIEDQGV
TKSELAEKFG PKVAELVDGL TKLDKLEFQS REQAQAESFR KMLLAMARDV RVILVKLADR
THNMRTLDHV PPEKRRRIAG ETMEIYAPIA HRLGLNTTYR ELQELSFRIG SPFRYATLEK
AVKAARGNRR EVVSRILETA QRALTDAGIP AEMTGREKTL YSIYRKMHDK QLSFSQVLDV
YGFRVVVDTQ MQCYMTMGAL HSLYKPMPGK FKDYIAIPKI NGYQSLHTTL VGPFGTPVEF
QIRTREMNQI AEAGVAAHWM YKQHHDEPDR AQQQAHQWLQ SLLDIQSQTG DSQEFLEHVK
IDLFPDAVYV FTPKGEIRAL PRGATALDFA YAVHSDLGNQ CVAVKINNEL LPLRTELKNG
DIVEVVTAPY SKPNPAWLTF VRTGKARAAI RHFLKTAKLD EAIQLGERLL EQALRQIGID
MKAVSAQVWE RVVQWTGNKA REDVFADLAL GRRVAAVVAR RLEILLQEGG HEGDEALMAA
VHTFAGDEAP AVTVSGDEGM AMVFSPCCRP IPGDPIVGYI GKGEGLQIHV QECRVAKRLH
GKDPEHWIDV MWAEHTTRAF DVSIKVLVRN TKGILARVAA DLTSADANVA HVSMEQEGYQ
EATYMTFLIQ VHDRVHLADV MRALRRNPDV IRIARDRGGD
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