Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1948 |
Symbol | |
ID | 8019606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2074088 |
End bp | 2075023 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830733 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002981901 |
Protein GI | 241663541 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.244059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.065003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC TGCCTCCTCT GAATGCCGTG CGCGCCTTTG AATCGGCGGC GCGCCATCTG AGTTTCACGC GTGCGGGCGA CGAGCTGAAC GTCACGCATG GCGCGATCAG CCGCCAGGTT CAGGCACTCG AGGCGTGGCT CGGGGTGTCG CTCTTTCGCA GGCTGAATCG GCGGGTGGAA CTGACTGATG CGGGCCAGCG CTACCTGTCG GAGATTGGCG TAGCACTTGA CCGCATCAGC ACGTCCAGCC AGGCGCTGCG CGACCGCGAC GCGGTGCGCA TCCTCCGCGT GAACAGCATC CCGACGTTCA CCATGCGCTG GCTGATTCCG CGGCTCTCCA CGTTCCAGAT GCGCTTTCCG CGCGTGGAGG TGCGGTTGAC CACCTCCATC GAAGAGATCG AGGACTTGCC CGATCATTTC GACGTGATCA TTCGTGGCGG GCCGGAGATT CATGCGGGGT TTCAATCGGG GCGCTTTCTG GACGAGAGCC GCTTTCCGGT GTGCAGCCCT GTGTTGCTGG AGCGCTTGCC GTTGTCGACG CCGTCGGAGT TGCGGCATCA CACGCTGCTG CATTCGGACA CGTTGCCCTC CGTGTGGCCA AGCTGGCTGG TGCTGGCCGG CGTACCAAAC CTGCGGCCTG CGCATGCGCT CACGTTCGAG CATTTCTATC TGTCCATTCA AGCCGCCATC GATGGGTTGG GTGTCGCGAT GGGGCCATCG GCGCTCATCA CGGATGATCT CGAGGAGGGG CGTCTTGTGG CACCGTTCCC CAATCTCGCG CTGGGCGCGC GCAGCTACTA CTGGTACAGC CCTGCGCGCA ATCTCGGTGA CGAAGTGGTG CAGGCTTTTT GCGCGTGGCT CGGCGAGGAC CGGCCACAAC GTCACGCAAA CCTGAACACA TCTCTGATCC CAGGTAACGG TGGTAACGCC ACGTAA
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Protein sequence | MRKLPPLNAV RAFESAARHL SFTRAGDELN VTHGAISRQV QALEAWLGVS LFRRLNRRVE LTDAGQRYLS EIGVALDRIS TSSQALRDRD AVRILRVNSI PTFTMRWLIP RLSTFQMRFP RVEVRLTTSI EEIEDLPDHF DVIIRGGPEI HAGFQSGRFL DESRFPVCSP VLLERLPLST PSELRHHTLL HSDTLPSVWP SWLVLAGVPN LRPAHALTFE HFYLSIQAAI DGLGVAMGPS ALITDDLEEG RLVAPFPNLA LGARSYYWYS PARNLGDEVV QAFCAWLGED RPQRHANLNT SLIPGNGGNA T
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