Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1945 |
Symbol | |
ID | 8019603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2072123 |
End bp | 2073157 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830730 |
Product | esterase, PHB depolymerase family |
Protein accession | YP_002981898 |
Protein GI | 241663538 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.198099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0353299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG TCACCCGCCT GGTCGACGCC CTGACCACAC CGGGCTTTGG CCGCCAGTCA TGGCCGCCTA AACCGGTTAA GCCGCTCAAG CCAACCACAC GCGGCGAGAG CCCGCGCCGC GTACGCCCCA CGCCCACCCA GGGCACCTTC GTCCGCGAAC AGTTCATCTA CGAACCCGAG TCGCCCGCCG TGGTGGCGCG CCGGCCGGAA TACTGCCTCT ACACACCGCC CACACGCGGC AGCAAGCTCC CGGCACTGAT GGTGATGCTG CATGGCTGCA AGCAGTCGGC CGAAGTCCTG GCGCATGGCA CGCGCATGAA CGCGCTGGCC GACCGTGAAG GCTTTATCGT GCTGTATCCG GAGCAGCCGC GCCGCGCGCA TCCGCAATGC TGCTGGCACT GGTATGACCC GGAGCATGCT GGCGCGCGCG AGGCCGACGG CATTGCCCAA CTGATCGAAC AAACCCTGGC ACAAACTGGC GCAGACCCCT CGCGCGTATA TCTGGCAGGG TTGTCGGCCG GCGCGGGATT GGCCGGCCTG ATGGCATTGC GTCATCCGAA GTTGTTTGCC GCGTTGGCGC TACATTCGGG CCCGGCCTTG GGCGTGGCAC GCTCGCCGGC GTCTGCATTG AACCTGATGC GCCGCGGGGC ACGCGTCGAC GCCGTCGATG CACTCTCCAG CGTGGTAAAT GTAGCCGCCT ATCCCGGCAT GCCAACGATG CTGTTGCACG GTCTGCGCGA TGAGGCCGTC AACCCCACCA ACCAAGCGCA GTTAGCCGCG CAGTTCCGCG CGCTGAATCA TCTGGGCGAT GGGCGCAACG TCTCACGCGA AACCACGCGC GGCGAGGGCT ATGTCCTGCG CAACGACATA CGCGACGGCG AATGCATCGT CAGCCTGTGC CAACTCACCG CCACGGGCCA CGCCTGGAGC GGCGGCGACC CGCGCTACGC CTTCCACACG CCGGGCCCGG ACGCGACCTG GCTGTGGTGG CAATTCGCAC GCCGGCACAT TCGCGATACA GCGCTCGCGG CGTAA
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Protein sequence | MKSVTRLVDA LTTPGFGRQS WPPKPVKPLK PTTRGESPRR VRPTPTQGTF VREQFIYEPE SPAVVARRPE YCLYTPPTRG SKLPALMVML HGCKQSAEVL AHGTRMNALA DREGFIVLYP EQPRRAHPQC CWHWYDPEHA GAREADGIAQ LIEQTLAQTG ADPSRVYLAG LSAGAGLAGL MALRHPKLFA ALALHSGPAL GVARSPASAL NLMRRGARVD AVDALSSVVN VAAYPGMPTM LLHGLRDEAV NPTNQAQLAA QFRALNHLGD GRNVSRETTR GEGYVLRNDI RDGECIVSLC QLTATGHAWS GGDPRYAFHT PGPDATWLWW QFARRHIRDT ALAA
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