| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1934 |
|---|
| Symbol | |
|---|
| ID | 8019591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2057190 |
|---|
| End bp | 2057948 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830718 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002981887 |
|---|
| Protein GI | 241663527 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0424955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA ATCTCAAGCT GGTCTCCACG GAAGCGACGT CGAAATCGGG CGTCAAGGCA
TCGGGGGCAA CACGCATGTC GGTCGAAGAA CGGATGTATC ACGAGATCTA CGACGCGATC
ATGGAGCACC GTCTGCCCCC GCGCACCAAG CTGACGGAGC ATGCGCTGTG CGAAATCTAT
GCCACCGCGC GTCATACGGT GCGCAAGGTC TTCTCCCAAC TGGCCGCTGA CGGCCTGGTC
GACCTGGAGC CGAATCGCGG CGCGTTCATC GCAGCGCCCT CCATCGACGA AGCCCACGCC
ATGTTCGAGC TGCGCCAGAT CCTGGAGCGC GCGGTGCTCG ACAAGGTTGG CCGCAGCAGC
AACCCAAAGG CGGCCATAGC GCCCCTGATG GAACTCGTCA AACAGGAACG CCAGGCGTTT
GTCACCCAGG ATCGTCCTCG CTGGATTCGT CTGTCGGCGG AATTTCACGT GGCGCTGGCC
GAGCAATCCG GCAATCCGCT GGTGGTCGAG ATGATGCGTC GACTGGTGTC GCGCACCACG
CTGATGATCG CCAGCGTGGA GGCTCCCGGC AACAACGCCT GCTCGTTTGA CGAACACCTC
GACATCCTCA ATGCCCTGGA GCGTGGCGAC GCCAGCGCTG CCCAGGCCCA CATGGCCCAG
CACTTGCAAT GCTGCGCCGA TCGCGTGCGC CCCGAAGCGC CCGCTGATTT CGATCTGCGT
TCGGTATTGG GCCCGCGCGG CGGGAAGGAC AAAGTCTAG
|
|---|
| Protein sequence | MSKNLKLVST EATSKSGVKA SGATRMSVEE RMYHEIYDAI MEHRLPPRTK LTEHALCEIY
ATARHTVRKV FSQLAADGLV DLEPNRGAFI AAPSIDEAHA MFELRQILER AVLDKVGRSS
NPKAAIAPLM ELVKQERQAF VTQDRPRWIR LSAEFHVALA EQSGNPLVVE MMRRLVSRTT
LMIASVEAPG NNACSFDEHL DILNALERGD ASAAQAHMAQ HLQCCADRVR PEAPADFDLR
SVLGPRGGKD KV
|
|---|
| |