| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1902 |
|---|
| Symbol | |
|---|
| ID | 8019559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2020254 |
|---|
| End bp | 2020901 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830686 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_002981855 |
|---|
| Protein GI | 241663495 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.908371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.500487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACAACA CGTATCCGCA TCCCATCATT GCCCGCGAGG GTTGGCCGTA CCTGGGCGGG
ATTTTCATCG TCACGCTCAT CGTGCAGGCT GCCGCCGGTT TCGGCTGGGC CTGGCCTTTC
TGGGTGCTGA CGCTGTTTGT GCTGCAGTTC TTCCGCGATC CGGCGCGCGC CGTGCCAACG
CAGGCCAATG CGATTCTTTC GCCGGCCGAC GGTCGCATCG TCGCAGTCGA GCAGGTACGT
GACCCGTACG CTGATCGCGA CGCGCTGAAG ATCAGCGTGT TCATGAACGT GTTCAACGTG
CACTCGAACC GCGCGCCGGT CGACGGCACG GTGCAGCAGG TGCAGTACTT CCCGGGCAAG
TTCGTCAATG CCGACCTCGA CAAGGCGTCG CTCGAGAACG AGCGCAATGC CATCGTTTTG
CGCCGCGCTG ATGGCCAGCT CGTCACTTCG GTGCAGGTGG CCGGATTGAT CGCGCGGCGC
ATCCTTTGCT ATACGAAGGC AGGCGAAGCG CTCACGCGTG GTCAGCGCTA TGGCTTCATC
CGTTTTGGCT CGCGTGTTGA CGTGTACCTG CCGCTGACGG CGCGCCCGCG CGTGACCATC
GGCGAAAAGG TATCCGCCAC GCTTACGGTG CTTGCTGAGC TGGACTGA
|
|---|
| Protein sequence | MNNTYPHPII AREGWPYLGG IFIVTLIVQA AAGFGWAWPF WVLTLFVLQF FRDPARAVPT
QANAILSPAD GRIVAVEQVR DPYADRDALK ISVFMNVFNV HSNRAPVDGT VQQVQYFPGK
FVNADLDKAS LENERNAIVL RRADGQLVTS VQVAGLIARR ILCYTKAGEA LTRGQRYGFI
RFGSRVDVYL PLTARPRVTI GEKVSATLTV LAELD
|
|---|
| |