| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1900 |
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| Symbol | |
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| ID | 8019557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2017511 |
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| End bp | 2019052 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830684 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002981853 |
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| Protein GI | 241663493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.183482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.348361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AACTCATCAT TTTCGATACC ACCTTGCGCG ACGGCGAGCA GTCCCCCGGG
GCGTCGATGA CCAAGGACGA GAAGATCCGC ATCGCCAAGC AGCTTGAGAG GCTCAAGGTG
GACGTGATCG AGGCTGGCTT TGCGGCAAGC TCAAACGGTG ACTTTGAAGC GATCCGTGCG
ATTGCGCTGT CGGTCAAGGA TTCGCGCATT TGCTCGCTCG CCCGCGCGAA CGACCGTGAT
ATTTCCCGCG CTGCCGAGGC GCTCAAGCCG GCGGGGCAGT TCCGCATCCA CACGTTCATC
GCCACATCGG CGCTGCACAT GGAGAAGAAG CTGCGCATGT CGCCGGATGA GGTGTACGAG
CAGGCGCGCC TGGCGGTGCG TTTTGCCCGC CAGTTCACCG ACGACATCGA ATTCTCGCCG
GAAGATGGCA GCCGCTCCGA CATGGACTTC CTCTGCCGCG TGCTGGAAGG CGTGATCGCC
GAAGGCGCCA CCACCATCAA TCTGCCGGAT ACGGTGGGCT ACGCGGTGCC GGAGGGCTAT
GCCGCGCTGA TCCGTTCGGT GCGTGAGCGC ATCCCCAATT CCGACAAGGC GATCTGGTCA
GTGCATTGCC ATAACGACCT CGGCATGGCG GTCGCCAACT CCCTGGCCGC TGTCAAACTG
GGCGGCGCAC GCCAGATTGA ATGCACGATC AACGGCCTGG GCGAGCGCGC CGGCAACACC
AGCCTCGAAG AGGTGGTGAT GGCCGTGAAG ACGCGTCGCG ACTACTTCAA TCTCGACGTG
GGTGTCGATA CCACGCAGAT CGTGCCGGCT TCCAAGCTGG TCTCGCAGAT CACCGGGTTC
GTCGTGCAGC CAAACAAGGC CGTCGTGGGC GCCAACGCTT TCGCGCACGC TTCGGGCATC
CACCAGGATG GCGTGCTCAA GGCGCGCGAC ACGTACGAAA TCATGCGAGC CGAAGACGTG
GGCTGGACGG CCAATAAGAT CGTCCTGGGC AAGCTCTCGG GCCGCAACGC GTTCAAGCAG
CGCCTGCAGG AACTGGGCAT TGAACTGGAT TCGGAAGCCG AGCTGAACGC TGCCTTCACC
CGCTTCAAGG AGCTGGCCGA TCAGAAGGCC GAGATCTTTG ACGAGGACAT CGTTGCCATC
GTCTCGAACG AGGCCCAGCA CAGCGAGGGC GAGCACTTCC GTTTCGTGTC GCTGGCCCAG
CGTTCGGAGA CTGGCGAACG TCCGCACGCG CGCATCGTCT TCGTTGCGGA CGGCAAGGAA
GTGACGGGCG AAGCGGAGGG CAATGGCCCG GTCGACGCCA CGCTGAACGC GATTGAGAGC
AAGGTCGCCA GCGGGGCAGA GCAGCTGCTG TATTCGGTCA ACGCGATCAC GACGGGCACG
CAGGCGCAGG GCGAAGTGAC GGTGCGGCTG TCGAAGTCGG GCCGCATCGT CAACGGTGTG
GGTACTGATC CGGACATCGT TGCGGCTTCG GCCAAGGCTT ACCTTGCTGC GCTCAACAAG
CTGCAGGACA AGAGCAGCGA AAAACTCAAC CCGCAGATCT GA
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| Protein sequence | MSDKLIIFDT TLRDGEQSPG ASMTKDEKIR IAKQLERLKV DVIEAGFAAS SNGDFEAIRA
IALSVKDSRI CSLARANDRD ISRAAEALKP AGQFRIHTFI ATSALHMEKK LRMSPDEVYE
QARLAVRFAR QFTDDIEFSP EDGSRSDMDF LCRVLEGVIA EGATTINLPD TVGYAVPEGY
AALIRSVRER IPNSDKAIWS VHCHNDLGMA VANSLAAVKL GGARQIECTI NGLGERAGNT
SLEEVVMAVK TRRDYFNLDV GVDTTQIVPA SKLVSQITGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQELGIELD SEAELNAAFT
RFKELADQKA EIFDEDIVAI VSNEAQHSEG EHFRFVSLAQ RSETGERPHA RIVFVADGKE
VTGEAEGNGP VDATLNAIES KVASGAEQLL YSVNAITTGT QAQGEVTVRL SKSGRIVNGV
GTDPDIVAAS AKAYLAALNK LQDKSSEKLN PQI
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