Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1886 |
Symbol | |
ID | 8019542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2004045 |
End bp | 2005340 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644830669 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_002981839 |
Protein GI | 241663479 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.415851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.35892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC TGCACGATCG ACATATCCAG CCGTTGATTC TCGCCGGTCT GAACGGCGAC AACTGGCATC TTGAAGATTA CGTCAAGCGT GGCGGCTATC AACAGCTCAA ACGCATCCTT ACCGAGAAGA TCACCCCCGA GCAGGTCATC GCTGACGTGA AGGCGTCGGG CCTGCGCGGC CGCGGCGGTG CGGGTTTCCC GACCGGTTTG AAGTGGAGCT TCATGCCGCG CCAGTTCCCG GGCCAGAAGT ATCTCGTCTG CAACACAGAC GAAGGTGAGC CGGGCACGTT CAAGGATCGC GACATCATCC GGTACAACCC GCACGCGCTG ATCGAAGGCA TGGCCATCGG CGGCTACGCG ATGGGCATTA CCGTGGGCTA CAACTACATC CACGGCGAGA TCTGGAACGA ATACAAGATC TTCGAACAGG CACTGGAAGA GGCGCGCGCT GCGGGCTTCC TCGGTGACAA CATCTTGGGG TCCGGCTTCA ACTTCCAGCT GCATGCGCAC CATGGTTATG GCGCGTACAT CTGCGGTGAA GAGACCGCAC TGCTCGAGTC GCTGGAAGGC AAGAAGGGCC AGCCGCGCTT CAAGCCGCCA TTCCCGGCGA GCTTCGGCCT GTACGGCAAG CCGACCACCA TCAACAACAC CGAAACCTTT GCCGCGGTGC CGTTCCTGCT GGCCATCGGT CCGGATAACT ACTTGAAGAT GGGCAAGCCG AACAACGGCG GCTCGAAGAT CTTCTCTGTG TCCGGCGACG TTGAGCGTCC GGGCAACTAC GAGATTCCGC TGGGCACCCC GTTCTCCAAG CTGCTGGAGC TTGCCGGCGG CATGCGCGGT GGTAAGAAGC TCAAGGCGGT CATCCCGGGT GGATCGTCGG CGCCGGTGGT GCCGGCTGAC CTGATGATGG CCTCCGACAT GGACTACGAC TCAATCGCCA AGGCCGGCTC GATGCTGGGC TCGGGCGCTG TCATCGTGAT GGACGAAACG CGCTGCATGG TGAAGTCGCT GCTGCGTCTG TCGTATTTCT ATTACGAAGA GTCGTGCGGC CAGTGCACGC CGTGCCGTGA GGGCACCGGG TGGCTGTACC GCGTCGTCGA TCGCATCGAG CACGGCAAGG GCCGCCAGGA AGACCTGGAC CTGCTGAACA ACGTGGCCGA AAACATCATG GGCCGGACCA TCTGCGCACT CGGCGATGCC GCTGCGATGC CGGTCCGCGG CATGCTCAAG CACTACTGGG ATGAGTTCGC GTATCACGTC GAACACAAGC AGTGCATGGT GCCCACCTAC CTTTAA
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Protein sequence | MTSLHDRHIQ PLILAGLNGD NWHLEDYVKR GGYQQLKRIL TEKITPEQVI ADVKASGLRG RGGAGFPTGL KWSFMPRQFP GQKYLVCNTD EGEPGTFKDR DIIRYNPHAL IEGMAIGGYA MGITVGYNYI HGEIWNEYKI FEQALEEARA AGFLGDNILG SGFNFQLHAH HGYGAYICGE ETALLESLEG KKGQPRFKPP FPASFGLYGK PTTINNTETF AAVPFLLAIG PDNYLKMGKP NNGGSKIFSV SGDVERPGNY EIPLGTPFSK LLELAGGMRG GKKLKAVIPG GSSAPVVPAD LMMASDMDYD SIAKAGSMLG SGAVIVMDET RCMVKSLLRL SYFYYEESCG QCTPCREGTG WLYRVVDRIE HGKGRQEDLD LLNNVAENIM GRTICALGDA AAMPVRGMLK HYWDEFAYHV EHKQCMVPTY L
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