Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1867 |
Symbol | |
ID | 8019523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1983565 |
End bp | 1984416 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830650 |
Product | urea ABC transporter, ATP-binding protein UrtD |
Protein accession | YP_002981820 |
Protein GI | 241663460 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.449649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.375358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGT TCACTGCACT CCCTGACCGC GCGGAGACCG GCACCGCCAC CGGCATGGGC CATCTGGTCG AGCCGGACAC GATCGACGTC TCGCACGGCG CCATCCTGTA TCTCGAAGAC GTGACCGTGC GCTTTGGCGG CTTTCGCGCA CTGAACGCGC TCACGCTGTC GATCGACCAC GGCGAACTGC GCTGCATCAT CGGCCCCAAC GGCGCGGGCA AGACCACGAT GATGGACGTG ATTACCGGCA AGACCGGGCC GCGCAATGCC GACGTGACCG GCCGCGTTTT CCTTGGCCAG ACCATCGACC TGCTGCGCCT GACCGAGCCG CGCATCGCGC AGATCGGCAT CGGCCGCAAG TTCCAGAAGC CGACCGTGTT CGAGCAGCAC ACCGTGTGGG AAAACCTGGA ACTGGCGATG AAGGCCGACA AGCGCTGGTG GGTCTCGCTG CGCGCGCGCC TGCTGAACGA CGGCCGCCAG CGCATCGAAG AAACGCTTGG TCGTATCCAT CTGGAAGCGG AGGCCTATCG GCCCGCCGGG CTGCTCTCGC ACGGCCAGAA ACAGCGGCTG GAGATCGGCA TGCTGCTGAT GCAGCAACCG CAACTGCTGC TGCTCGACGA ACCGGTCGCC GGCATGACGG ATGAGGAGAC GATGCAGCTC GCAACGTTGC TCAACGGCCT GCGTGGCACG TGCTCGATCA TGGTCGTCGA GCACGACATG GAGTTCGTCG CCGCGCTGGC AGGGGCAGAA GGGCGCGTGA CCGTGCTGGC TGAAGGCAGT GTCCTCGCCG AAGGCACGCT CGATGCCGTC AAGCGCGATG AGCGGGTGAT CGAATCGTAT TTAGGGCGTT GA
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Protein sequence | MSTFTALPDR AETGTATGMG HLVEPDTIDV SHGAILYLED VTVRFGGFRA LNALTLSIDH GELRCIIGPN GAGKTTMMDV ITGKTGPRNA DVTGRVFLGQ TIDLLRLTEP RIAQIGIGRK FQKPTVFEQH TVWENLELAM KADKRWWVSL RARLLNDGRQ RIEETLGRIH LEAEAYRPAG LLSHGQKQRL EIGMLLMQQP QLLLLDEPVA GMTDEETMQL ATLLNGLRGT CSIMVVEHDM EFVAALAGAE GRVTVLAEGS VLAEGTLDAV KRDERVIESY LGR
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