| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1819 |
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| Symbol | |
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| ID | 8019475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1937552 |
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| End bp | 1938622 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830603 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002981773 |
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| Protein GI | 241663413 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.7246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.707373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA TTGCAGTGTT GCCGGGTGAC GGCATTGGCA AGGAAATCGT CGCCGAGGCC
GTGAAGGTGC TCAAGGTGTT GGGCGAGCCA TTCGAGATGG AATTTGCCCC GGTGGGCGGC
GCCGGCTACG AGGCCAAGGG CCATCCGCTG CCGGAAGACA CCCTCAAGCT CGCCAAGGAA
GCCGATGCGA TCCTGTTCGG CGCCGTGGGC GACTGGAAGT ACGACACGCT GGCGCGCGAA
CTGCGTCCGG AGCAGGCCAT TCTGGGTCTG CGCAAGCACC TGCAACTGTT CGCCAACTTC
CGTCCGGCGA TCTGCTACCC CGAGTTGACC GGCGCATCGA GCCTCAAGCC GGAAATCGTT
GCCGGTCTGG ACATCCTGAT CGTGCGTGAG TTGAATGGCG ACATTTACTT CGGCCAACCG
CGCGGCGTGC GCGCGGCGCC CGACGGGCTG TTCGCCGGCG CGCGCGAAGG TTTCGACACC
ATGCGCTACG CCGAGCCGGA AATCCGCCGC ATCGCGCACG TCGCCTTCCA GGCTGCCGCC
AAGCGCGGCA AGAAGCTGTG CAGCGTCGAC AAGGCGAACG TGCTCGAGAC GTTCCAGTTC
TGGAGAGACA TCGTCATCGA CGTCCACAAG GAGTATCCGG AAGTCGAGCT GTCGCACATG
TACGTGGACA ACGCGGCCAT GCAGCTCGTG AAGGCGCCGA AGAACTTCGA CGTAATCGTC
ACCGGCAACA TGTTCGGCGA CATCCTCTCG GACGAGGCTG CCATGCTGAC GGGCTCGATC
GGCATGCTGC CGTCGGCGTC GCTCGACGCG AACAACAAAG GCCTGTATGA GCCGTCGCAC
GGCTCCGCGC CGGACATCGC TGGCAAGGGG ATCGCCAACC CGCTGGCGAC GATCCTGTCG
GCGGCAATGA TGCTGCGCTA CTCGCTGAAC AAGGCCGAGC AGGCCGATCG CATCGAAAAC
GCCGTCAAAA AGGTGCTCGC CCAGGGCTAT CGCACGGGCG ACATCCTGAC GCCGGGTTGC
AAGCAGGTCG GGACGGTGGA GATGGGTGAC GCGGTGGTCG CTGCGCTGTA A
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| Protein sequence | MTKIAVLPGD GIGKEIVAEA VKVLKVLGEP FEMEFAPVGG AGYEAKGHPL PEDTLKLAKE
ADAILFGAVG DWKYDTLARE LRPEQAILGL RKHLQLFANF RPAICYPELT GASSLKPEIV
AGLDILIVRE LNGDIYFGQP RGVRAAPDGL FAGAREGFDT MRYAEPEIRR IAHVAFQAAA
KRGKKLCSVD KANVLETFQF WRDIVIDVHK EYPEVELSHM YVDNAAMQLV KAPKNFDVIV
TGNMFGDILS DEAAMLTGSI GMLPSASLDA NNKGLYEPSH GSAPDIAGKG IANPLATILS
AAMMLRYSLN KAEQADRIEN AVKKVLAQGY RTGDILTPGC KQVGTVEMGD AVVAAL
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